DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTTPGST
Uniprot ID:
Q15431
Source protein:
Synaptonemal complex protein 1
Source gene:
SYCP1
Class:
DEG_SCF_FBW7_1
Location:
936:942
E3 ligase:
FBXW7
DEGRON score:
0.9957
ASA_SCORE:
69.4714
COIL:
0.6713
CONS_SCORE:
0.4765
DSS_SCORE:
0.5018
HELIX:
0.1404
FCONS_SCORE:
1.0463
RIG_SCORE:
0.6919
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M951I
TCGA-34-2604
LUSC
TCGA
LTTPGST
DEG_SCF_FBW7_1
0.0833
p.M951I
DO26433
LUSC
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.0833
p.R952P
TCGA-43-5668
LUSC
TCGA
LTTPGST
DEG_SCF_FBW7_1
0.0556
p.R952P
DO26608
LUSC
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.0556
p.R952G
TCGA-55-8302
LUAD
TCGA
LTTPGST
DEG_SCF_FBW7_1
0.0556
p.R952G
DO45312
LUAD
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.0556
p.S941F
TCGA-56-8622
LUSC
TCGA
LTTPGST
DEG_SCF_FBW7_1
0.6871
p.S941F
TCGA-Z2-A8RT
SKCM
TCGA
LTTPGST
DEG_SCF_FBW7_1
0.6871
p.S941F
DO45449
LUSC
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.6871
p.S941F
DO51301
SKCM
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.6871
p.A947D
TCGA-AX-A05Z
UCEC
TCGA
LTTPGST
DEG_SCF_FBW7_1
0.1944
p.A947D
DO40884
UCEC
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.1944
p.R952W
TCGA-D1-A17Q
UCEC
TCGA
LTTPGST
DEG_SCF_FBW7_1
0.0556
p.R952W
DO41903
UCEC
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.0556
p.L936V
TCGA-IN-A6RP
STAD
TCGA
LTTPGST
DEG_SCF_FBW7_1
0.5654
p.L936V
DO51741
STAD
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.5654
p.P939S
TCGA-YD-A9TA
SKCM
TCGA
LTTPGST
DEG_SCF_FBW7_1
0.6752
p.P939S
DO219503
SKCM
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.6752
p.T928A
DO228659
LICA
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.1111
p.S935F
DO222536
MELA
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.3056
p.T937A
DO229248
THCA
ICGC
LTTPGST
DEG_SCF_FBW7_1
0.7139
p.K931N
SIDM01045
Endometrial Carcinoma
GDSC
LTTPGST
DEG_SCF_FBW7_1
0.3056
p.K931N
EN
endometrium
COSMIC
LTTPGST
DEG_SCF_FBW7_1
0.3056
p.A932V
NUGC-3
stomach
COSMIC
LTTPGST
DEG_SCF_FBW7_1
0.2222
p.D938G
SNU-C5
large_intestine
COSMIC
LTTPGST
DEG_SCF_FBW7_1
0.7198
Drug responses associated with SYCP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTTPGST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15431
Synaptonemal complex protein 1
DEG_SCF_FBW7_1
936:942
LTTPGST
FBXW7
0.9957
More...