DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTTPPSS
Uniprot ID:
Q8N3V7
Source protein:
Synaptopodin
Source gene:
SYNPO
Class:
DEG_SCF_FBW7_1
Location:
160:166
E3 ligase:
FBXW7
DEGRON score:
0.9409
ASA_SCORE:
83.6143
COIL:
0.9109
CONS_SCORE:
0.3581
DSS_SCORE:
0.641
HELIX:
0.0531
FCONS_SCORE:
1.0146
RIG_SCORE:
0.6401
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R169C
TCGA-AX-A2HD
UCEC
TCGA
LTTPPSS
DEG_SCF_FBW7_1
0.25
p.T161P
TCGA-EO-A22R
UCEC
TCGA
LTTPPSS
DEG_SCF_FBW7_1
0.5919
p.T161P
DO42713
UCEC
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.5919
p.A151V
TCGA-G4-6304
COAD
TCGA
LTTPPSS
DEG_SCF_FBW7_1
0.0833
p.A151V
DO10639
COAD
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.0833
p.V171I
DO222427
BTCA
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.1944
p.V160L
DO229380
BTCA
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.6765
p.R152W
DO230339
COCA
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.1111
p.R152W
SIDM01169
Ovarian Carcinoma
GDSC
LTTPPSS
DEG_SCF_FBW7_1
0.1111
p.R152W
ACH-000885
Ovarian Cancer
CCLE
LTTPPSS
DEG_SCF_FBW7_1
0.1111
p.R152W
TOV-21G
ovary
COSMIC
LTTPPSS
DEG_SCF_FBW7_1
0.1111
p.T175M
DO233867
GACA
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.0833
p.S153I
DO228952
LICA
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.1389
p.V171F
DO229034
LICA
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.1944
p.P164S
DO229177
LMS
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.5641
p.K159N
DO41361
UCEC
ICGC
LTTPPSS
DEG_SCF_FBW7_1
0.3056
p.A157S
SIDM01102
Non-Cancerous
GDSC
LTTPPSS
DEG_SCF_FBW7_1
0.25
p.A157S
ACH-002316
Non-Cancerous
CCLE
LTTPPSS
DEG_SCF_FBW7_1
0.25
p.A157S
WIL2-NS
haematopoietic_and_lymphoid_tissue
COSMIC
LTTPPSS
DEG_SCF_FBW7_1
0.25
p.S153R
ACH-000124
Lymphoma
CCLE
LTTPPSS
DEG_SCF_FBW7_1
0.1389
p.T154K
ACH-002664
Colon/Colorectal Cancer
CCLE
LTTPPSS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with SYNPO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTTPPSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N3V7
Synaptopodin
DEG_SCF_FBW7_1
160:166
LTTPPSS
FBXW7
0.9409
More...