DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTVFTE
Uniprot ID:
P13984
Source protein:
General transcription factor IIF subunit 2
Source gene:
GTF2F2
Class:
LIG_APCC_ABBA_1
Location:
93:98
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8052
ASA_SCORE:
46.8333
COIL:
0.3855
CONS_SCORE:
0.5481
DSS_SCORE:
0.3517
HELIX:
0.1045
FCONS_SCORE:
1.2129
RIG_SCORE:
0.81
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G90E
TCGA-22-5481
LUSC
TCGA
LTVFTE
LIG_APCC_ABBA_1
0.25
p.G90E
DO27160
LUSC
ICGC
LTVFTE
LIG_APCC_ABBA_1
0.25
p.S99I
TCGA-AX-A06F
UCEC
TCGA
LTVFTE
LIG_APCC_ABBA_1
0.3056
p.S99I
DO41752
UCEC
ICGC
LTVFTE
LIG_APCC_ABBA_1
0.3056
p.L104P
TCGA-EY-A5W2
UCEC
TCGA
LTVFTE
LIG_APCC_ABBA_1
0.1667
p.L104P
DO48177
UCEC
ICGC
LTVFTE
LIG_APCC_ABBA_1
0.1667
p.E98K
DO223057
ESCA
ICGC
LTVFTE
LIG_APCC_ABBA_1
0.7022
p.T92S
DO233169
GACA
ICGC
LTVFTE
LIG_APCC_ABBA_1
0.3056
p.V84F
DO229018
LICA
ICGC
LTVFTE
LIG_APCC_ABBA_1
0.0833
p.S87I
DO229035
LICA
ICGC
LTVFTE
LIG_APCC_ABBA_1
0.6111
p.E98D
DO229068
PRAD
ICGC
LTVFTE
LIG_APCC_ABBA_1
0.5647
p.K103N
DO229268
THCA
ICGC
LTVFTE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with GTF2F2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTVFTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13984
General transcription factor IIF subunit 2
LIG_APCC_ABBA_1
93:98
LTVFTE
APC,CDC20,FZR1
0.8052
More...