DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTVHPE
Uniprot ID:
Q9H307
Source protein:
Pinin
Source gene:
PNN
Class:
LIG_APCC_ABBA_1
Location:
546:551
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9927
ASA_SCORE:
108.1167
COIL:
0.929
CONS_SCORE:
0.18
DSS_SCORE:
0.588
HELIX:
0.0355
FCONS_SCORE:
0.9732
RIG_SCORE:
0.728
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V545A
TCGA-86-8672
LUAD
TCGA
LTVHPE
LIG_APCC_ABBA_1
0.3056
p.V545A
DO25434
LUAD
ICGC
LTVHPE
LIG_APCC_ABBA_1
0.3056
p.K553N
DO48428
BLCA
ICGC
LTVHPE
LIG_APCC_ABBA_1
0.2778
p.K553E
DO233270
GACA
ICGC
LTVHPE
LIG_APCC_ABBA_1
0.2778
p.K536N
DO45094
LIRI
ICGC
LTVHPE
LIG_APCC_ABBA_1
0.5
p.H549R
SIDM00413
B-Cell Non-Hodgkin's Lymphoma
GDSC
LTVHPE
LIG_APCC_ABBA_1
0.8244
p.H549R
ACH-000534
Lymphoma
CCLE
LTVHPE
LIG_APCC_ABBA_1
0.8244
p.H549R
WSU-DLCL2
haematopoietic_and_lymphoid_tissue
COSMIC
LTVHPE
LIG_APCC_ABBA_1
0.8244
p.H549P
SIDM01012
Other Blood Cancers
GDSC
LTVHPE
LIG_APCC_ABBA_1
0.7694
p.H549P
JVM-3
haematopoietic_and_lymphoid_tissue
COSMIC
LTVHPE
LIG_APCC_ABBA_1
0.7694
Drug responses associated with PNN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTVHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H307
Pinin
LIG_APCC_ABBA_1
546:551
LTVHPE
APC,CDC20,FZR1
0.9927
More...