DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTVTPGTS
Uniprot ID:
Q6UXF1
Source protein:
Transmembrane protein 108
Source gene:
TMEM108
Class:
DEG_SCF_FBW7_1
Location:
336:343
E3 ligase:
FBXW7
DEGRON score:
0.9984
ASA_SCORE:
74.8875
COIL:
0.9266
CONS_SCORE:
0.5472
DSS_SCORE:
0.6296
HELIX:
0.0251
FCONS_SCORE:
1.1023
RIG_SCORE:
0.6604
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P340T
TCGA-28-5211
GBM
TCGA
LTVTPGTS
DEG_SCF_FBW7_1
0.7031
p.P340T
DO11016
GBM
ICGC
LTVTPGTS
DEG_SCF_FBW7_1
0.7031
p.Q326H
TCGA-D1-A2G5
UCEC
TCGA
LTVTPGTS
DEG_SCF_FBW7_1
0.0556
p.Q326H
DO40918
UCEC
ICGC
LTVTPGTS
DEG_SCF_FBW7_1
0.0556
p.W335C
DO229051
LICA
ICGC
LTVTPGTS
DEG_SCF_FBW7_1
0.3056
p.S343N
SIDM01113
Other Sarcomas
GDSC
LTVTPGTS
DEG_SCF_FBW7_1
0.7069
p.S343N
ACH-000939
Sarcoma
CCLE
LTVTPGTS
DEG_SCF_FBW7_1
0.7069
p.S343N
SK-UT-1
soft_tissue
COSMIC
LTVTPGTS
DEG_SCF_FBW7_1
0.7069
p.S334F
SIDM00217
Colorectal Carcinoma
GDSC
LTVTPGTS
DEG_SCF_FBW7_1
0.2778
p.S334F
ACH-000999
Colon/Colorectal Cancer
CCLE
LTVTPGTS
DEG_SCF_FBW7_1
0.2778
p.S334F
SNU-1040
large_intestine
COSMIC
LTVTPGTS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with TMEM108 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTVTPGTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6UXF1
Transmembrane protein 108
DEG_SCF_FBW7_1
336:343
LTVTPGTS
FBXW7
0.9984
More...