DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTVYAD
Uniprot ID:
P78363
Source protein:
Retinal-specific phospholipid-transporting ATPase ABCA4
Source gene:
ABCA4
Class:
LIG_APCC_ABBA_1
Location:
2060:2065
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5181
ASA_SCORE:
53.6833
COIL:
0.458
CONS_SCORE:
0.4692
DSS_SCORE:
0.0269
HELIX:
0.4568
FCONS_SCORE:
0.8188
RIG_SCORE:
0.9368
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G2059C
TCGA-75-6214
LUAD
TCGA
LTVYAD
LIG_APCC_ABBA_1
0.3056
p.G2059C
TCGA-DA-A1I7
SKCM
TCGA
LTVYAD
LIG_APCC_ABBA_1
0.3056
p.N2075D
TCGA-AJ-A3OK
UCEC
TCGA
LTVYAD
LIG_APCC_ABBA_1
0.0556
p.D2065N
TCGA-DU-6392
LGG
TCGA
LTVYAD
LIG_APCC_ABBA_1
0.6932
Drug responses associated with ABCA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTVYAD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78363
Retinal-specific phospholipid-transporting ATPase ABCA4
LIG_APCC_ABBA_1
2060:2065
LTVYAD
APC,CDC20,FZR1
0.5181
More...