DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVFTPFAS
Uniprot ID:
Q5HYW2
Source protein:
NHS-like protein 2
Source gene:
NHSL2
Class:
DEG_SCF_FBW7_1
Location:
947:954
E3 ligase:
FBXW7
DEGRON score:
0.937
ASA_SCORE:
85.025
COIL:
0.9184
CONS_SCORE:
0
DSS_SCORE:
0.4957
HELIX:
0.0393
FCONS_SCORE:
0
RIG_SCORE:
0.7119
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S937N
TCGA-2W-A8YY
CESC
TCGA
LVFTPFAS
DEG_SCF_FBW7_1
0.0556
p.S937N
DO223732
CESC
ICGC
LVFTPFAS
DEG_SCF_FBW7_1
0.0556
p.Q964H
TCGA-AP-A0LM
UCEC
TCGA
LVFTPFAS
DEG_SCF_FBW7_1
0.0556
p.G939V
TCGA-E8-A2EA
THCA
TCGA
LVFTPFAS
DEG_SCF_FBW7_1
0.1111
p.E940K
TCGA-FW-A3R5
SKCM
TCGA
LVFTPFAS
DEG_SCF_FBW7_1
0.1389
p.L960M
MOLT-16
haematopoietic_and_lymphoid_tissue
COSMIC
LVFTPFAS
DEG_SCF_FBW7_1
0.1667
p.G957C
NCI-H2347
lung
COSMIC
LVFTPFAS
DEG_SCF_FBW7_1
0.25
p.G957S
WM-115
skin
COSMIC
LVFTPFAS
DEG_SCF_FBW7_1
0.25
Drug responses associated with NHSL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVFTPFAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5HYW2
NHS-like protein 2
DEG_SCF_FBW7_1
947:954
LVFTPFAS
FBXW7
0.937
More...