DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVGTPNPS
Uniprot ID:
Q93062
Source protein:
RNA-binding protein with multiple splicing
Source gene:
RBPMS
Class:
DEG_SCF_FBW7_1
Location:
110:117
E3 ligase:
FBXW7
DEGRON score:
0.9671
ASA_SCORE:
77.7875
COIL:
0.9231
CONS_SCORE:
0.5164
DSS_SCORE:
0.5671
HELIX:
0.0223
FCONS_SCORE:
0.9141
RIG_SCORE:
0.6395
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F127L
TCGA-AA-3510
COAD
TCGA
LVGTPNPS
DEG_SCF_FBW7_1
0.0556
p.T103M
TCGA-VQ-A8P2
STAD
TCGA
LVGTPNPS
DEG_SCF_FBW7_1
0.1389
p.T103M
DO51761
STAD
ICGC
LVGTPNPS
DEG_SCF_FBW7_1
0.1389
p.A107G
DO233517
PRAD
ICGC
LVGTPNPS
DEG_SCF_FBW7_1
0.3611
p.K107N
SIDM01611
Endometrial Carcinoma
GDSC
LVGTPNPS
DEG_SCF_FBW7_1
0.3611
p.K107N
ACH-000996
Endometrial/Uterine Cancer
CCLE
LVGTPNPS
DEG_SCF_FBW7_1
0.3611
p.V124A
ACH-001991
Primary
CCLE
LVGTPNPS
DEG_SCF_FBW7_1
0.1389
p.S120R
MCC13
skin
COSMIC
LVGTPNPS
DEG_SCF_FBW7_1
0.25
p.P114L
LN-18
central_nervous_system
COSMIC
LVGTPNPS
DEG_SCF_FBW7_1
0.7582
p.M114L
LP-1
haematopoietic_and_lymphoid_tissue
COSMIC
LVGTPNPS
DEG_SCF_FBW7_1
0.711
p.T109P
EJM
haematopoietic_and_lymphoid_tissue
COSMIC
LVGTPNPS
DEG_SCF_FBW7_1
0.75
Drug responses associated with RBPMS mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVGTPNPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q93062
RNA-binding protein with multiple splicing
DEG_SCF_FBW7_1
110:117
LVGTPNPS
FBXW7
0.9671
More...