DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVGTPPES
Uniprot ID:
A6NDB9
Source protein:
Paralemmin-3
Source gene:
PALM3
Class:
DEG_SCF_FBW7_1
Location:
148:155
E3 ligase:
FBXW7
DEGRON score:
0.8427
ASA_SCORE:
85.8875
COIL:
0.9454
CONS_SCORE:
0.7106
DSS_SCORE:
0.7151
HELIX:
0.0151
FCONS_SCORE:
0.9336
RIG_SCORE:
0.5857
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S157C
TCGA-JW-A5VL
CESC
TCGA
LVGTPPES
DEG_SCF_FBW7_1
0.7222
p.S157C
DO49976
CESC
ICGC
LVGTPPES
DEG_SCF_FBW7_1
0.7222
p.A142V
DO233103
GACA
ICGC
LVGTPPES
DEG_SCF_FBW7_1
0.1667
p.P145S
DO233935
GACA
ICGC
LVGTPPES
DEG_SCF_FBW7_1
0.25
p.T151M
SIDM00042
Pancreatic Carcinoma
GDSC
LVGTPPES
DEG_SCF_FBW7_1
0.8534
p.T151M
PL4
pancreas
COSMIC
LVGTPPES
DEG_SCF_FBW7_1
0.8534
Drug responses associated with PALM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVGTPPES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NDB9
Paralemmin-3
DEG_SCF_FBW7_1
148:155
LVGTPPES
FBXW7
0.8427
More...