DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVHTPSMT
Uniprot ID:
Q86YS3
Source protein:
Rab11 family-interacting protein 4
Source gene:
RAB11FIP4
Class:
DEG_SCF_FBW7_1
Location:
190:197
E3 ligase:
FBXW7
DEGRON score:
0.9298
ASA_SCORE:
74.2125
COIL:
0.8403
CONS_SCORE:
0.2554
DSS_SCORE:
0.5558
HELIX:
0.1053
FCONS_SCORE:
0.9474
RIG_SCORE:
0.6886
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S195C
TCGA-L5-A4OX
ESCA
TCGA
LVHTPSMT
DEG_SCF_FBW7_1
0.643
p.S202Y
TCGA-OR-A5JA
ACC
TCGA
LVHTPSMT
DEG_SCF_FBW7_1
0.1944
p.S189T
SIDM00416
B-Cell Non-Hodgkin's Lymphoma
GDSC
LVHTPSMT
DEG_SCF_FBW7_1
0.3056
p.S189T
VAL
haematopoietic_and_lymphoid_tissue
COSMIC
LVHTPSMT
DEG_SCF_FBW7_1
0.3056
p.R188Q
BE2-M17
autonomic_ganglia
COSMIC
LVHTPSMT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with RAB11FIP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVHTPSMT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86YS3
Rab11 family-interacting protein 4
DEG_SCF_FBW7_1
190:197
LVHTPSMT
FBXW7
0.9298
More...