DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVIFPE
Uniprot ID:
Q8WW22
Source protein:
DnaJ homolog subfamily A member 4
Source gene:
DNAJA4
Class:
LIG_APCC_ABBA_1
Location:
326:331
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9159
ASA_SCORE:
47.35
COIL:
0.3775
CONS_SCORE:
0.5624
DSS_SCORE:
0.006
HELIX:
0.0118
FCONS_SCORE:
1.2514
RIG_SCORE:
0.9322
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P339T
TCGA-15-1446
GBM
TCGA
LVIFPE
LIG_APCC_ABBA_1
0.2222
p.V324M
TCGA-23-1114
OV
TCGA
LVIFPE
LIG_APCC_ABBA_1
0.2778
p.S319F
TCGA-5L-AAT1
BRCA
TCGA
LVIFPE
LIG_APCC_ABBA_1
0.1389
p.G328R
TCGA-AA-3833
COAD
TCGA
LVIFPE
LIG_APCC_ABBA_1
0.7568
p.G328R
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LVIFPE
LIG_APCC_ABBA_1
0.7568
p.G328R
SIDM01263
T-Lymphoblastic Leukemia
GDSC
LVIFPE
LIG_APCC_ABBA_1
0.7568
p.G328R
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LVIFPE
LIG_APCC_ABBA_1
0.7568
p.D335N
TCGA-AP-A0LM
UCEC
TCGA
LVIFPE
LIG_APCC_ABBA_1
0.2222
p.G328E
TCGA-DF-A2KU
UCEC
TCGA
LVIFPE
LIG_APCC_ABBA_1
0.7199
p.G328V
TCGA-DU-7294
LGG
TCGA
LVIFPE
LIG_APCC_ABBA_1
0.7532
p.R334H
TCGA-E6-A1LX
UCEC
TCGA
LVIFPE
LIG_APCC_ABBA_1
0.25
p.V316I
TCGA-EY-A212
UCEC
TCGA
LVIFPE
LIG_APCC_ABBA_1
0.0556
p.L340F
DO227935
BRCA
ICGC
LVIFPE
LIG_APCC_ABBA_1
0.0833
p.Q324H
DO8264
COAD
ICGC
LVIFPE
LIG_APCC_ABBA_1
0.2778
p.L337M
ACH-000608
Ovarian Cancer
CCLE
LVIFPE
LIG_APCC_ABBA_1
0.1667
p.R323Q
ACH-000994
Endometrial/Uterine Cancer
CCLE
LVIFPE
LIG_APCC_ABBA_1
0.25
p.R323Q
ACH-000998
Colon/Colorectal Cancer
CCLE
LVIFPE
LIG_APCC_ABBA_1
0.25
Drug responses associated with DNAJA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVIFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WW22
DnaJ homolog subfamily A member 4
LIG_APCC_ABBA_1
326:331
LVIFPE
APC,CDC20,FZR1
0.9159
More...