DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVLFFD
Uniprot ID:
Q9ULD4
Source protein:
Bromodomain and PHD finger-containing protein 3
Source gene:
BRPF3
Class:
LIG_APCC_ABBA_1
Location:
1135:1140
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5954
ASA_SCORE:
16.95
COIL:
0.1713
CONS_SCORE:
0.4426
DSS_SCORE:
0.0551
HELIX:
0.005
FCONS_SCORE:
1.2596
RIG_SCORE:
0.9716
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1146H
TCGA-44-2657
LUAD
TCGA
LVLFFD
LIG_APCC_ABBA_1
0.1667
p.R1143H
TCGA-AZ-4614
COAD
TCGA
LVLFFD
LIG_APCC_ABBA_1
0.25
p.A1129T
TCGA-B5-A11E
UCEC
TCGA
LVLFFD
LIG_APCC_ABBA_1
0.1667
p.L1135I
TCGA-GN-A26D
SKCM
TCGA
LVLFFD
LIG_APCC_ABBA_1
0.6063
p.E1128K
TCGA-GU-AATP
BLCA
TCGA
LVLFFD
LIG_APCC_ABBA_1
0.1389
p.R1150K
SIDM00007
Other Solid Cancers
GDSC
LVLFFD
LIG_APCC_ABBA_1
0.0556
p.R1150K
ACH-001550
Skin Cancer
CCLE
LVLFFD
LIG_APCC_ABBA_1
0.0556
p.E1128Q
SIDM00726
Non-Small Cell Lung Carcinoma
GDSC
LVLFFD
LIG_APCC_ABBA_1
0.1389
p.E1128Q
SIDM01757
Bladder Carcinoma
GDSC
LVLFFD
LIG_APCC_ABBA_1
0.1389
p.E1128Q
ACH-000741
Bladder Cancer
CCLE
LVLFFD
LIG_APCC_ABBA_1
0.1389
p.E1128Q
ACH-000875
Lung Cancer
CCLE
LVLFFD
LIG_APCC_ABBA_1
0.1389
p.E1128Q
NCI-H2347
lung
COSMIC
LVLFFD
LIG_APCC_ABBA_1
0.1389
p.T1144A
ACH-000986
Colon/Colorectal Cancer
CCLE
LVLFFD
LIG_APCC_ABBA_1
0.2222
p.T1144A
HT-115
large_intestine
COSMIC
LVLFFD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with BRPF3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVLFFD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULD4
Bromodomain and PHD finger-containing protein 3
LIG_APCC_ABBA_1
1135:1140
LVLFFD
APC,CDC20,FZR1
0.5954
More...