DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LVLHGD
Uniprot ID:
Q9Y5T5
Source protein:
Ubiquitin carboxyl-terminal hydrolase 16
Source gene:
USP16
Class:
LIG_APCC_ABBA_1
Location:
775:780
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5025
ASA_SCORE:
76.6
COIL:
0.678
CONS_SCORE:
0.2566
DSS_SCORE:
0.3367
HELIX:
0.178
FCONS_SCORE:
1.0117
RIG_SCORE:
0.7854
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E786Q
TCGA-CV-A45P
HNSC
TCGA
LVLHGD
LIG_APCC_ABBA_1
0.1667
p.L775F
TCGA-EO-A22U
UCEC
TCGA
LVLHGD
LIG_APCC_ABBA_1
0.587
p.E786K
TCGA-FD-A5BT
BLCA
TCGA
LVLHGD
LIG_APCC_ABBA_1
0.1667
p.A768T
TCGA-VQ-A8P2
STAD
TCGA
LVLHGD
LIG_APCC_ABBA_1
0.1389
p.E785K
DO44032
BLCA
ICGC
LVLHGD
LIG_APCC_ABBA_1
0.1944
p.E785Q
DO219026
HNSC
ICGC
LVLHGD
LIG_APCC_ABBA_1
0.1944
p.G778V
DO229025
LICA
ICGC
LVLHGD
LIG_APCC_ABBA_1
0.7532
p.M786I
DO229038
LICA
ICGC
LVLHGD
LIG_APCC_ABBA_1
0.1667
p.T766I
DO231810
LINC
ICGC
LVLHGD
LIG_APCC_ABBA_1
0.0833
p.E787D
DO232761
PBCA
ICGC
LVLHGD
LIG_APCC_ABBA_1
0.1389
p.A767T
DO51761
STAD
ICGC
LVLHGD
LIG_APCC_ABBA_1
0.1111
p.L774F
DO43755
UCEC
ICGC
LVLHGD
LIG_APCC_ABBA_1
0.3056
p.G779S
SIDM01943
Colorectal Carcinoma
GDSC
LVLHGD
LIG_APCC_ABBA_1
0.5882
p.F785C
SIDM00845
Burkitt's Lymphoma
GDSC
LVLHGD
LIG_APCC_ABBA_1
0.1944
p.G790V
KYSE-70
oesophagus
COSMIC
LVLHGD
LIG_APCC_ABBA_1
0.1667
Drug responses associated with USP16 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVLHGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5T5
Ubiquitin carboxyl-terminal hydrolase 16
LIG_APCC_ABBA_1
775:780
LVLHGD
APC,CDC20,FZR1
0.5025
More...