DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVLYGE
Uniprot ID:
Q8IY21
Source protein:
Probable ATP-dependent RNA helicase DDX60
Source gene:
DDX60
Class:
LIG_APCC_ABBA_1
Location:
976:981
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8341
ASA_SCORE:
55.9833
COIL:
0.4955
CONS_SCORE:
0.435
DSS_SCORE:
0.1184
HELIX:
0.0888
FCONS_SCORE:
1.2035
RIG_SCORE:
0.8926
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V977L
TCGA-55-6979
LUAD
TCGA
LVLYGE
LIG_APCC_ABBA_1
0.5654
p.V977L
DO24110
LUAD
ICGC
LVLYGE
LIG_APCC_ABBA_1
0.5654
p.V990A
TCGA-FI-A2D5
UCEC
TCGA
LVLYGE
LIG_APCC_ABBA_1
0.0833
p.V990A
DO41331
UCEC
ICGC
LVLYGE
LIG_APCC_ABBA_1
0.0833
p.Q967K
DO229015
LICA
ICGC
LVLYGE
LIG_APCC_ABBA_1
0.0833
p.V974A
DO222702
MELA
ICGC
LVLYGE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with DDX60 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVLYGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IY21
Probable ATP-dependent RNA helicase DDX60
LIG_APCC_ABBA_1
976:981
LVLYGE
APC,CDC20,FZR1
0.8341
More...