DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LVPFQD
Uniprot ID:
Q9NVT9
Source protein:
Armadillo repeat-containing protein 1
Source gene:
ARMC1
Class:
LIG_APCC_ABBA_1
Location:
221:226
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9554
ASA_SCORE:
75.6667
COIL:
0.5037
CONS_SCORE:
0.3376
DSS_SCORE:
0.5841
HELIX:
0.0332
FCONS_SCORE:
0.7659
RIG_SCORE:
0.7515
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T227I
TCGA-AB-2807
LAML
TCGA
LVPFQD
LIG_APCC_ABBA_1
0.3056
p.V231A
TCGA-CG-4460
STAD
TCGA
LVPFQD
LIG_APCC_ABBA_1
0.1944
p.N234T
ACH-001991
Primary
CCLE
LVPFQD
LIG_APCC_ABBA_1
0.1111
Drug responses associated with ARMC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVPFQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NVT9
Armadillo repeat-containing protein 1
LIG_APCC_ABBA_1
221:226
LVPFQD
APC,CDC20,FZR1
0.9554
More...