DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVPHEE
Uniprot ID:
Q76LX8
Source protein:
A disintegrin and metalloproteinase with thrombospondin motifs 13
Source gene:
ADAMTS13
Class:
LIG_APCC_ABBA_1
Location:
1138:1143
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6566
ASA_SCORE:
87.95
COIL:
0.7088
CONS_SCORE:
0.3837
DSS_SCORE:
0.5396
HELIX:
0.146
FCONS_SCORE:
0.9669
RIG_SCORE:
0.7309
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1152T
TCGA-CA-6718
COAD
TCGA
LVPHEE
LIG_APCC_ABBA_1
0.0833
p.A1152T
DO7801
COAD
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.0833
p.R1149W
TCGA-VQ-A8PD
STAD
TCGA
LVPHEE
LIG_APCC_ABBA_1
0.1667
p.R1149W
DO51768
STAD
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.1667
p.R1149W
SIDM00672
Hepatocellular Carcinoma
GDSC
LVPHEE
LIG_APCC_ABBA_1
0.1667
p.R1149W
SIDM00967
Ovarian Carcinoma
GDSC
LVPHEE
LIG_APCC_ABBA_1
0.1667
p.E1144D
DO51863
BLCA
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.3056
p.S1146C
DO44077
BLCA
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.25
p.G1131E
DO228262
BRCA
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.1389
p.A1145T
DO233109
GACA
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.2778
p.P1133S
DO229062
LICA
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.1944
p.G1148R
DO220851
MELA
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.1944
p.V1142I
DO232761
PBCA
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.7076
p.R1141C
DO41847
UCEC
ICGC
LVPHEE
LIG_APCC_ABBA_1
0.8301
p.E1144Q
TGBC24TKB
biliary_tract
COSMIC
LVPHEE
LIG_APCC_ABBA_1
0.3056
p.D1148G
SNU-1040
large_intestine
COSMIC
LVPHEE
LIG_APCC_ABBA_1
0.1944
p.G1135A
CAPAN-1
pancreas
COSMIC
LVPHEE
LIG_APCC_ABBA_1
0.25
Drug responses associated with ADAMTS13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVPHEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q76LX8
A disintegrin and metalloproteinase with thrombospondin motifs 13
LIG_APCC_ABBA_1
1138:1143
LVPHEE
APC,CDC20,FZR1
0.6566
More...