DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVQTPESE
Uniprot ID:
Q9C026
Source protein:
E3 ubiquitin-protein ligase TRIM9
Source gene:
TRIM9
Class:
DEG_SCF_FBW7_2
Location:
38:45
E3 ligase:
FBXW7
DEGRON score:
0.984
ASA_SCORE:
85.575
COIL:
0.7664
CONS_SCORE:
0.7221
DSS_SCORE:
0.3601
HELIX:
0.1821
FCONS_SCORE:
0.9987
RIG_SCORE:
0.72
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R35H
TCGA-96-8170
LUSC
TCGA
LVQTPESE
DEG_SCF_FBW7_2
0.25
p.R35H
DO27691
LUSC
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.25
p.A53T
TCGA-HU-A4H8
STAD
TCGA
LVQTPESE
DEG_SCF_FBW7_2
0.1111
p.A53T
DO47869
STAD
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.1111
p.S49R
TCGA-VR-A8EW
ESCA
TCGA
LVQTPESE
DEG_SCF_FBW7_2
0.6667
p.N36H
TCGA-XU-A92R
THYM
TCGA
LVQTPESE
DEG_SCF_FBW7_2
0.2778
p.R51W
DO234334
ESAD
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.1667
p.R51W
DO233866
GACA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.1667
p.A34T
DO233888
GACA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.2222
p.H50N
DO229038
LICA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.1944
p.Q40K
DO229037
LICA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.5833
p.R35S
DO229045
LICA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.25
p.Q31E
SIDM00937
Oral Cavity Carcinoma
GDSC
LVQTPESE
DEG_SCF_FBW7_2
0.1389
p.Q31E
ACH-000832
Head and Neck Cancer
CCLE
LVQTPESE
DEG_SCF_FBW7_2
0.1389
p.Q31E
CAL-27
upper_aerodigestive_tract
COSMIC
LVQTPESE
DEG_SCF_FBW7_2
0.1389
p.A32E
SIDM00228
Thyroid Gland Carcinoma
GDSC
LVQTPESE
DEG_SCF_FBW7_2
0.1667
p.A32E
ACH-000897
Thyroid Cancer
CCLE
LVQTPESE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with TRIM9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVQTPESE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C026
E3 ubiquitin-protein ligase TRIM9
DEG_SCF_FBW7_2
38:45
LVQTPESE
FBXW7
0.984
More...