DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVQTPESE
Uniprot ID:
Q9C026
Source protein:
E3 ubiquitin-protein ligase TRIM9
Source gene:
TRIM9
Class:
DEG_SCF_FBW7_2
Location:
38:45
E3 ligase:
FBXW7
DEGRON score:
0.984
ASA_SCORE:
85.575
COIL:
0.7664
CONS_SCORE:
0.7221
DSS_SCORE:
0.3601
HELIX:
0.1821
FCONS_SCORE:
0.9987
RIG_SCORE:
0.72
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S49R
TCGA-VR-A8EW
ESCA
TCGA
LVQTPESE
DEG_SCF_FBW7_2
0.6667
p.Q40K
DO229037
LICA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.5833
p.N36H
TCGA-XU-A92R
THYM
TCGA
LVQTPESE
DEG_SCF_FBW7_2
0.2778
p.R35H
TCGA-96-8170
LUSC
TCGA
LVQTPESE
DEG_SCF_FBW7_2
0.25
p.R35H
DO27691
LUSC
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.25
p.R35S
DO229045
LICA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.25
p.A34T
DO233888
GACA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.2222
p.H50N
DO229038
LICA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.1944
p.R51W
DO234334
ESAD
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.1667
p.R51W
DO233866
GACA
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.1667
p.A32E
SIDM00228
Thyroid Gland Carcinoma
GDSC
LVQTPESE
DEG_SCF_FBW7_2
0.1667
p.A32E
ACH-000897
Thyroid Cancer
CCLE
LVQTPESE
DEG_SCF_FBW7_2
0.1667
p.Q31E
SIDM00937
Oral Cavity Carcinoma
GDSC
LVQTPESE
DEG_SCF_FBW7_2
0.1389
p.Q31E
ACH-000832
Head and Neck Cancer
CCLE
LVQTPESE
DEG_SCF_FBW7_2
0.1389
p.Q31E
CAL-27
upper_aerodigestive_tract
COSMIC
LVQTPESE
DEG_SCF_FBW7_2
0.1389
p.A53T
TCGA-HU-A4H8
STAD
TCGA
LVQTPESE
DEG_SCF_FBW7_2
0.1111
p.A53T
DO47869
STAD
ICGC
LVQTPESE
DEG_SCF_FBW7_2
0.1111
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Drug responses associated with TRIM9 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LVQTPESE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C026
E3 ubiquitin-protein ligase TRIM9
DEG_SCF_FBW7_2
38:45
LVQTPESE
FBXW7
0.984
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