DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVTPAPS
Uniprot ID:
Q99062
Source protein:
Granulocyte colony-stimulating factor receptor
Source gene:
CSF3R
Class:
DEG_SCF_FBW7_1
Location:
800:806
E3 ligase:
FBXW7
DEGRON score:
0.9763
ASA_SCORE:
73.4
COIL:
0.8754
CONS_SCORE:
0.3883
DSS_SCORE:
0.3487
HELIX:
0.0431
FCONS_SCORE:
0.8556
RIG_SCORE:
0.7324
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R796C
TCGA-AX-A2HD
UCEC
TCGA
LVTPAPS
DEG_SCF_FBW7_1
0.2222
p.R796C
SIDM00303
Ovarian Carcinoma
GDSC
LVTPAPS
DEG_SCF_FBW7_1
0.2222
p.R796C
JHOS-4
ovary
COSMIC
LVTPAPS
DEG_SCF_FBW7_1
0.2222
p.A805V
TCGA-B5-A11Y
UCEC
TCGA
LVTPAPS
DEG_SCF_FBW7_1
0.6936
p.A805V
SIDM00781
Colorectal Carcinoma
GDSC
LVTPAPS
DEG_SCF_FBW7_1
0.6936
p.A805V
SIDM00780
Colorectal Carcinoma
GDSC
LVTPAPS
DEG_SCF_FBW7_1
0.6936
p.A805V
SNU-C2B
large_intestine
COSMIC
LVTPAPS
DEG_SCF_FBW7_1
0.6936
p.K812E
TCGA-CG-4305
STAD
TCGA
LVTPAPS
DEG_SCF_FBW7_1
0.1667
p.P809L
TCGA-FS-A4FC
SKCM
TCGA
LVTPAPS
DEG_SCF_FBW7_1
0.25
p.T799S
DO5465
BRCA
ICGC
LVTPAPS
DEG_SCF_FBW7_1
0.3056
p.A804V
DO233258
GACA
ICGC
LVTPAPS
DEG_SCF_FBW7_1
0.5825
p.Q793K
DO228943
LICA
ICGC
LVTPAPS
DEG_SCF_FBW7_1
0.1389
p.Q793K
DO229037
LICA
ICGC
LVTPAPS
DEG_SCF_FBW7_1
0.1389
p.P815S
DO232761
PBCA
ICGC
LVTPAPS
DEG_SCF_FBW7_1
0.0833
p.P803T
DO37447
SKCM
ICGC
LVTPAPS
DEG_SCF_FBW7_1
0.7031
p.L790F
DO50284
SKCM
ICGC
LVTPAPS
DEG_SCF_FBW7_1
0.0556
p.V812F
DO38467
STAD
ICGC
LVTPAPS
DEG_SCF_FBW7_1
0.1667
p.Y794C
SIDM01259
B-Lymphoblastic Leukemia
GDSC
LVTPAPS
DEG_SCF_FBW7_1
0.1667
p.Y794C
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
LVTPAPS
DEG_SCF_FBW7_1
0.1667
p.A794D
ACH-000712
Lung Cancer
CCLE
LVTPAPS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with CSF3R mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVTPAPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99062
Granulocyte colony-stimulating factor receptor
DEG_SCF_FBW7_1
800:806
LVTPAPS
FBXW7
0.9763
More...