DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVTPEPT
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_SCF_FBW7_1
Location:
1587:1593
E3 ligase:
FBXW7
DEGRON score:
0.9905
ASA_SCORE:
100.5
COIL:
0.9481
CONS_SCORE:
0.2657
DSS_SCORE:
0.7089
HELIX:
0.0144
FCONS_SCORE:
0.9858
RIG_SCORE:
0.6709
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1590T
TCGA-AP-A051
UCEC
TCGA
LVTPEPT
DEG_SCF_FBW7_1
0.7031
p.R1603W
TCGA-DD-AAE2
LIHC
TCGA
LVTPEPT
DEG_SCF_FBW7_1
0.0556
p.R1595W
TCGA-DS-A1OB
CESC
TCGA
LVTPEPT
DEG_SCF_FBW7_1
0.2778
p.R1595W
SIDM00128
Head and Neck Carcinoma
GDSC
LVTPEPT
DEG_SCF_FBW7_1
0.2778
p.R1595W
ACH-002249
Head and Neck Cancer
CCLE
LVTPEPT
DEG_SCF_FBW7_1
0.2778
p.R1595W
JHU-011
upper_aerodigestive_tract
COSMIC
LVTPEPT
DEG_SCF_FBW7_1
0.2778
p.S1583C
SIDM00920
Breast Carcinoma
GDSC
LVTPEPT
DEG_SCF_FBW7_1
0.2222
p.S1583C
ACH-000783
Breast Cancer
CCLE
LVTPEPT
DEG_SCF_FBW7_1
0.2222
p.S1583C
CAMA-1
breast
COSMIC
LVTPEPT
DEG_SCF_FBW7_1
0.2222
p.S1594Y
SIDM00534
Colorectal Carcinoma
GDSC
LVTPEPT
DEG_SCF_FBW7_1
0.3056
p.S1594Y
ACH-000986
Colon/Colorectal Cancer
CCLE
LVTPEPT
DEG_SCF_FBW7_1
0.3056
p.S1594Y
HT-115
large_intestine
COSMIC
LVTPEPT
DEG_SCF_FBW7_1
0.3056
p.T1589N
ACH-001853
Bile Duct Cancer
CCLE
LVTPEPT
DEG_SCF_FBW7_1
0.8166
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVTPEPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SCF_FBW7_1
1587:1593
LVTPEPT
FBXW7
0.9905
More...