DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LVTPKKE
Uniprot ID:
P49792
Source protein:
E3 SUMO-protein ligase RanBP2
Source gene:
RANBP2
Class:
DEG_SCF_FBW7_2
Location:
1410:1416
E3 ligase:
FBXW7
DEGRON score:
0.7753
ASA_SCORE:
85.1429
COIL:
0.749
CONS_SCORE:
0.2806
DSS_SCORE:
0.2438
HELIX:
0.0787
FCONS_SCORE:
0.9409
RIG_SCORE:
0.7873
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1404F
TCGA-49-4487
LUAD
TCGA
LVTPKKE
DEG_SCF_FBW7_2
0.1667
p.V1404F
DO24780
LUAD
ICGC
LVTPKKE
DEG_SCF_FBW7_2
0.1667
p.R1407Q
TCGA-AP-A056
UCEC
TCGA
LVTPKKE
DEG_SCF_FBW7_2
0.25
p.R1407Q
DO43971
UCEC
ICGC
LVTPKKE
DEG_SCF_FBW7_2
0.25
p.S1422N
TCGA-AP-A0LM
UCEC
TCGA
LVTPKKE
DEG_SCF_FBW7_2
0.6111
p.S1422N
DO43306
UCEC
ICGC
LVTPKKE
DEG_SCF_FBW7_2
0.6111
p.S1422N
ACH-000123
Ovarian Cancer
CCLE
LVTPKKE
DEG_SCF_FBW7_2
0.6111
p.A1409T
TCGA-EY-A215
UCEC
TCGA
LVTPKKE
DEG_SCF_FBW7_2
0.3056
p.A1409T
DO42665
UCEC
ICGC
LVTPKKE
DEG_SCF_FBW7_2
0.3056
p.E1416K
TCGA-ND-A4WC
UCS
TCGA
LVTPKKE
DEG_SCF_FBW7_2
0.7022
p.S1422G
DO8858
COAD
ICGC
LVTPKKE
DEG_SCF_FBW7_2
0.6111
p.W1419L
SIDM00330
Neuroblastoma
GDSC
LVTPKKE
DEG_SCF_FBW7_2
0.25
p.W1419L
ACH-001355
Neuroblastoma
CCLE
LVTPKKE
DEG_SCF_FBW7_2
0.25
p.W1419L
LAN-6
autonomic_ganglia
COSMIC
LVTPKKE
DEG_SCF_FBW7_2
0.25
p.V1404I
SIDM00156
Neuroblastoma
GDSC
LVTPKKE
DEG_SCF_FBW7_2
0.1667
p.V1404I
NB7
autonomic_ganglia
COSMIC
LVTPKKE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with RANBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LVTPKKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49792
E3 SUMO-protein ligase RanBP2
DEG_SCF_FBW7_2
1410:1416
LVTPKKE
FBXW7
0.7753
More...