DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LWGTPHYS
Uniprot ID:
Q8NDV7
Source protein:
Trinucleotide repeat-containing gene 6A protein
Source gene:
TNRC6A
Class:
DEG_SCF_FBW7_1
Location:
1918:1925
E3 ligase:
FBXW7
DEGRON score:
0.9808
ASA_SCORE:
52.5125
COIL:
0.8445
CONS_SCORE:
0.4253
DSS_SCORE:
0.3329
HELIX:
0.0583
FCONS_SCORE:
0.9534
RIG_SCORE:
0.7182
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1930C
TCGA-86-7955
LUAD
TCGA
LWGTPHYS
DEG_SCF_FBW7_1
0.1944
p.G1930C
DO23612
LUAD
ICGC
LWGTPHYS
DEG_SCF_FBW7_1
0.1944
p.T1921I
TCGA-AG-A002
READ
TCGA
LWGTPHYS
DEG_SCF_FBW7_1
0.7078
p.L1928M
TCGA-EA-A3HU
CESC
TCGA
LWGTPHYS
DEG_SCF_FBW7_1
0.25
p.L1928M
DO6320
CESC
ICGC
LWGTPHYS
DEG_SCF_FBW7_1
0.25
p.H1923Y
DO233865
GACA
ICGC
LWGTPHYS
DEG_SCF_FBW7_1
0.6118
p.T1908A
SIDM00845
Burkitt's Lymphoma
GDSC
LWGTPHYS
DEG_SCF_FBW7_1
0.0556
p.T1908A
SIDM00461
Acute Myeloid Leukemia
GDSC
LWGTPHYS
DEG_SCF_FBW7_1
0.0556
p.T1908A
SIDM01519
Head and Neck Carcinoma
GDSC
LWGTPHYS
DEG_SCF_FBW7_1
0.0556
p.T1908A
ACH-000786
Lymphoma
CCLE
LWGTPHYS
DEG_SCF_FBW7_1
0.0556
p.T1908A
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
LWGTPHYS
DEG_SCF_FBW7_1
0.0556
p.T1908A
OCI-AML5
haematopoietic_and_lymphoid_tissue
COSMIC
LWGTPHYS
DEG_SCF_FBW7_1
0.0556
p.T1908A
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
LWGTPHYS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with TNRC6A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LWGTPHYS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NDV7
Trinucleotide repeat-containing gene 6A protein
DEG_SCF_FBW7_1
1918:1925
LWGTPHYS
FBXW7
0.9808
More...