DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LYLYKD
Uniprot ID:
Q5T5U3
Source protein:
Rho GTPase-activating protein 21
Source gene:
ARHGAP21
Class:
LIG_APCC_ABBA_1
Location:
970:975
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5903
ASA_SCORE:
36.9167
COIL:
0.2352
CONS_SCORE:
0.3666
DSS_SCORE:
0.316
HELIX:
0.0082
FCONS_SCORE:
1.0433
RIG_SCORE:
0.8417
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T980R
TCGA-06-0154
GBM
TCGA
LYLYKD
LIG_APCC_ABBA_1
0.6389
p.T980R
DO12292
GBM
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.6389
p.M961I
TCGA-44-6775
LUAD
TCGA
LYLYKD
LIG_APCC_ABBA_1
0.0833
p.M961I
DO24517
LUAD
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.0833
p.H968R
TCGA-66-2769
LUSC
TCGA
LYLYKD
LIG_APCC_ABBA_1
0.2778
p.H968R
DO26522
LUSC
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.2778
p.R966L
TCGA-B5-A1MX
UCEC
TCGA
LYLYKD
LIG_APCC_ABBA_1
0.2222
p.R966L
DO41999
UCEC
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.2222
p.R966L
SIDM00660
Colorectal Carcinoma
GDSC
LYLYKD
LIG_APCC_ABBA_1
0.2222
p.R966L
ACH-000985
Colon/Colorectal Cancer
CCLE
LYLYKD
LIG_APCC_ABBA_1
0.2222
p.R966L
LS-411N
large_intestine
COSMIC
LYLYKD
LIG_APCC_ABBA_1
0.2222
p.E978K
TCGA-BH-A0HF
BRCA
TCGA
LYLYKD
LIG_APCC_ABBA_1
0.25
p.E978K
DO1749
BRCA
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.25
p.R966W
TCGA-EJ-5530
PRAD
TCGA
LYLYKD
LIG_APCC_ABBA_1
0.2222
p.R966W
DO36264
PRAD
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.2222
p.P982L
TCGA-EY-A2OM
UCEC
TCGA
LYLYKD
LIG_APCC_ABBA_1
0.1389
p.P982L
DO43025
UCEC
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.1389
p.R977T
TCGA-GD-A6C6
BLCA
TCGA
LYLYKD
LIG_APCC_ABBA_1
0.2778
p.R977T
DO48504
BLCA
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.2778
p.V963I
DO52481
COCA
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.1389
p.Q979K
DO228952
LICA
ICGC
LYLYKD
LIG_APCC_ABBA_1
0.2222
p.Y971C
SIDM01097
Other Solid Cancers
GDSC
LYLYKD
LIG_APCC_ABBA_1
0.5976
p.Y971C
SK-PN-DW
bone
COSMIC
LYLYKD
LIG_APCC_ABBA_1
0.5976
p.Y961C
SK-PN-DW
bone
COSMIC
LYLYKD
LIG_APCC_ABBA_1
0.0833
p.S975N
HD-MY-Z
haematopoietic_and_lymphoid_tissue
COSMIC
LYLYKD
LIG_APCC_ABBA_1
0.7069
p.S976N
HD-MY-Z
haematopoietic_and_lymphoid_tissue
COSMIC
LYLYKD
LIG_APCC_ABBA_1
0.3056
p.A983P
NCI-H650
lung
COSMIC
LYLYKD
LIG_APCC_ABBA_1
0.5556
Drug responses associated with ARHGAP21 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LYLYKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T5U3
Rho GTPase-activating protein 21
LIG_APCC_ABBA_1
970:975
LYLYKD
APC,CDC20,FZR1
0.5903
More...