DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LYTPAQT
Uniprot ID:
A6NFN3
Source protein:
RNA binding protein fox-1 homolog 3
Source gene:
RBFOX3
Class:
DEG_SCF_FBW7_1
Location:
47:53
E3 ligase:
FBXW7
DEGRON score:
0.9831
ASA_SCORE:
78
COIL:
0.7829
CONS_SCORE:
0.3868
DSS_SCORE:
0.8155
HELIX:
0.0211
FCONS_SCORE:
1.0109
RIG_SCORE:
0.6594
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T49I
TCGA-BH-A18G
BRCA
TCGA
LYTPAQT
DEG_SCF_FBW7_1
0.7078
p.T49I
DO3686
BRCA
ICGC
LYTPAQT
DEG_SCF_FBW7_1
0.7078
p.P50T
DO229037
LICA
ICGC
LYTPAQT
DEG_SCF_FBW7_1
0.7031
p.Q52H
TCGA-GM-A2DO
BRCA
TCGA
LYTPAQT
DEG_SCF_FBW7_1
0.647
p.Q52H
DO2037
BRCA
ICGC
LYTPAQT
DEG_SCF_FBW7_1
0.647
p.H54Q
SIDM00939
Non-Small Cell Lung Carcinoma
GDSC
LYTPAQT
DEG_SCF_FBW7_1
0.3056
p.E56K
SIDM00935
Other Solid Cancers
GDSC
LYTPAQT
DEG_SCF_FBW7_1
0.25
p.P58T
DO228974
LICA
ICGC
LYTPAQT
DEG_SCF_FBW7_1
0.1944
p.E61V
TCGA-OR-A5KB
ACC
TCGA
LYTPAQT
DEG_SCF_FBW7_1
0.1111
p.E61K
DO228310
BRCA
ICGC
LYTPAQT
DEG_SCF_FBW7_1
0.1111
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Drug responses associated with RBFOX3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LYTPAQT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NFN3
RNA binding protein fox-1 homolog 3
DEG_SCF_FBW7_1
47:53
LYTPAQT
FBXW7
0.9831
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