DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MATPGSE
Uniprot ID:
Q9Y2L9
Source protein:
Leucine-rich repeat and calponin homology domain-containing protein 1
Source gene:
LRCH1
Class:
DEG_SCF_FBW7_2
Location:
1:7
E3 ligase:
FBXW7
DEGRON score:
0.9768
ASA_SCORE:
95.5143
COIL:
0.9597
CONS_SCORE:
0.3312
DSS_SCORE:
0.8897
HELIX:
0.017
FCONS_SCORE:
1.3197
RIG_SCORE:
0.6053
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S16L
TCGA-BH-A18P
BRCA
TCGA
MATPGSE
DEG_SCF_FBW7_2
0.0833
p.S16L
TCGA-UC-A7PI
CESC
TCGA
MATPGSE
DEG_SCF_FBW7_2
0.0833
p.S16L
DO3346
BRCA
ICGC
MATPGSE
DEG_SCF_FBW7_2
0.0833
p.S16L
DO51616
CESC
ICGC
MATPGSE
DEG_SCF_FBW7_2
0.0833
Drug responses associated with LRCH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MATPGSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2L9
Leucine-rich repeat and calponin homology domain-containing protein 1
DEG_SCF_FBW7_2
1:7
MATPGSE
FBXW7
0.9768
More...