DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MATPVVT
Uniprot ID:
Q9BVA0
Source protein:
Katanin p80 WD40 repeat-containing subunit B1
Source gene:
KATNB1
Class:
DEG_SCF_FBW7_1
Location:
1:7
E3 ligase:
FBXW7
DEGRON score:
0.7815
ASA_SCORE:
93.1714
COIL:
0.909
CONS_SCORE:
0.3604
DSS_SCORE:
0.5981
HELIX:
0.0376
FCONS_SCORE:
0.6487
RIG_SCORE:
0.8218
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A2T
TCGA-AP-A1DK
UCEC
TCGA
MATPVVT
DEG_SCF_FBW7_1
0.6028
p.A2T
DO42033
UCEC
ICGC
MATPVVT
DEG_SCF_FBW7_1
0.6028
p.V17I
TCGA-T2-A6X0
HNSC
TCGA
MATPVVT
DEG_SCF_FBW7_1
0.0556
p.V17I
DO219069
HNSC
ICGC
MATPVVT
DEG_SCF_FBW7_1
0.0556
p.V17I
SIDM00370
T-Lymphoblastic Leukemia
GDSC
MATPVVT
DEG_SCF_FBW7_1
0.0556
p.V17I
TALL-1
haematopoietic_and_lymphoid_tissue
COSMIC
MATPVVT
DEG_SCF_FBW7_1
0.0556
p.T7I
ACH-000634
Brain Cancer
CCLE
MATPVVT
DEG_SCF_FBW7_1
0.7078
p.P4A
ACH-001033
Unknown
CCLE
MATPVVT
DEG_SCF_FBW7_1
0.7503
Drug responses associated with KATNB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MATPVVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BVA0
Katanin p80 WD40 repeat-containing subunit B1
DEG_SCF_FBW7_1
1:7
MATPVVT
FBXW7
0.7815
More...