DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MDSTPALT
Uniprot ID:
Q5T4F4
Source protein:
Protrudin
Source gene:
ZFYVE27
Class:
DEG_SCF_FBW7_1
Location:
258:265
E3 ligase:
FBXW7
DEGRON score:
0.9201
ASA_SCORE:
71.5875
COIL:
0.8321
CONS_SCORE:
0.2979
DSS_SCORE:
0.8301
HELIX:
0.0818
FCONS_SCORE:
0.788
RIG_SCORE:
0.63
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T261M
TCGA-A5-A0G2
UCEC
TCGA
MDSTPALT
DEG_SCF_FBW7_1
0.7423
p.T261M
TCGA-AA-3864
COAD
TCGA
MDSTPALT
DEG_SCF_FBW7_1
0.7423
p.T261M
SIDM01943
Colorectal Carcinoma
GDSC
MDSTPALT
DEG_SCF_FBW7_1
0.7423
p.A258T
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
MDSTPALT
DEG_SCF_FBW7_1
0.7139
p.A258V
DO233272
GACA
ICGC
MDSTPALT
DEG_SCF_FBW7_1
0.6936
p.A258V
DO52402
UCEC
ICGC
MDSTPALT
DEG_SCF_FBW7_1
0.6936
p.A263S
DO229028
LICA
ICGC
MDSTPALT
DEG_SCF_FBW7_1
0.6477
p.P266H
TCGA-EE-A29X
SKCM
TCGA
MDSTPALT
DEG_SCF_FBW7_1
0.3056
p.P266H
DO37595
SKCM
ICGC
MDSTPALT
DEG_SCF_FBW7_1
0.3056
p.C257R
HEC-1
endometrium
COSMIC
MDSTPALT
DEG_SCF_FBW7_1
0.3056
p.T267M
ACH-001422
Prostate Cancer
CCLE
MDSTPALT
DEG_SCF_FBW7_1
0.2778
p.P267L
697
haematopoietic_and_lymphoid_tissue
COSMIC
MDSTPALT
DEG_SCF_FBW7_1
0.2778
p.F255L
DO51936
BLCA
ICGC
MDSTPALT
DEG_SCF_FBW7_1
0.25
p.L270I
TCGA-57-1994
OV
TCGA
MDSTPALT
DEG_SCF_FBW7_1
0.1944
p.L270I
DO30510
OV
ICGC
MDSTPALT
DEG_SCF_FBW7_1
0.1944
p.L270F
TCGA-W3-AA1V
SKCM
TCGA
MDSTPALT
DEG_SCF_FBW7_1
0.1944
p.L270F
DO51276
SKCM
ICGC
MDSTPALT
DEG_SCF_FBW7_1
0.1944
p.G252E
SIDM01617
Endometrial Carcinoma
GDSC
MDSTPALT
DEG_SCF_FBW7_1
0.1667
p.G252E
ACH-000994
Endometrial/Uterine Cancer
CCLE
MDSTPALT
DEG_SCF_FBW7_1
0.1667
p.S272F
TCGA-21-1079
LUSC
TCGA
MDSTPALT
DEG_SCF_FBW7_1
0.1389
p.P251L
DO51272
SKCM
ICGC
MDSTPALT
DEG_SCF_FBW7_1
0.1389
p.V251I
ACH-001719
Ovarian Cancer
CCLE
MDSTPALT
DEG_SCF_FBW7_1
0.1389
p.C250R
HEC-1
endometrium
COSMIC
MDSTPALT
DEG_SCF_FBW7_1
0.1111
p.V275M
DO10582
COAD
ICGC
MDSTPALT
DEG_SCF_FBW7_1
0.0556
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Drug responses associated with ZFYVE27 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of MDSTPALT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T4F4
Protrudin
DEG_SCF_FBW7_1
258:265
MDSTPALT
FBXW7
0.9201
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