DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
MDTTPGGT
Uniprot ID:
Q9UHV7
Source protein:
Mediator of RNA polymerase II transcription subunit 13
Source gene:
MED13
Class:
DEG_SCF_FBW7_1
Location:
860:867
E3 ligase:
FBXW7
DEGRON score:
0.9963
ASA_SCORE:
77.0375
COIL:
0.9398
CONS_SCORE:
0.3556
DSS_SCORE:
0.57
HELIX:
0.0155
FCONS_SCORE:
0.9688
RIG_SCORE:
0.6743
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S859N
TCGA-06-5416
GBM
TCGA
MDTTPGGT
DEG_SCF_FBW7_1
0.3056
p.S859N
DO10880
GBM
ICGC
MDTTPGGT
DEG_SCF_FBW7_1
0.3056
p.S874C
TCGA-44-7670
LUAD
TCGA
MDTTPGGT
DEG_SCF_FBW7_1
0.1389
p.S874C
TCGA-AC-A23H
BRCA
TCGA
MDTTPGGT
DEG_SCF_FBW7_1
0.1389
p.S874C
DO2401
BRCA
ICGC
MDTTPGGT
DEG_SCF_FBW7_1
0.1389
p.S874C
DO23555
LUAD
ICGC
MDTTPGGT
DEG_SCF_FBW7_1
0.1389
p.M850I
TCGA-BS-A0UV
UCEC
TCGA
MDTTPGGT
DEG_SCF_FBW7_1
0.0556
p.M850I
DO42793
UCEC
ICGC
MDTTPGGT
DEG_SCF_FBW7_1
0.0556
p.E856Q
TCGA-FD-A6TA
BLCA
TCGA
MDTTPGGT
DEG_SCF_FBW7_1
0.2222
p.E856Q
DO49753
BLCA
ICGC
MDTTPGGT
DEG_SCF_FBW7_1
0.2222
p.V868F
DO229213
THCA
ICGC
MDTTPGGT
DEG_SCF_FBW7_1
0.3056
p.I876M
SIDM00412
B-Cell Non-Hodgkin's Lymphoma
GDSC
MDTTPGGT
DEG_SCF_FBW7_1
0.0833
p.I876M
WSU-NHL
haematopoietic_and_lymphoid_tissue
COSMIC
MDTTPGGT
DEG_SCF_FBW7_1
0.0833
p.T862A
SIDM01574
Plasma Cell Myeloma
GDSC
MDTTPGGT
DEG_SCF_FBW7_1
0.6028
p.T862A
ACH-000588
Myeloma
CCLE
MDTTPGGT
DEG_SCF_FBW7_1
0.6028
p.T862K
ACH-000219
Skin Cancer
CCLE
MDTTPGGT
DEG_SCF_FBW7_1
0.6195
p.T862K
ACH-000470
Colon/Colorectal Cancer
CCLE
MDTTPGGT
DEG_SCF_FBW7_1
0.6195
p.T862K
ACH-001199
Colon/Colorectal Cancer
CCLE
MDTTPGGT
DEG_SCF_FBW7_1
0.6195
Drug responses associated with MED13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MDTTPGGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UHV7
Mediator of RNA polymerase II transcription subunit 13
DEG_SCF_FBW7_1
860:867
MDTTPGGT
FBXW7
0.9963
More...