DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
MELHRE
Uniprot ID:
Q5VZ89
Source protein:
DENN domain-containing protein 4C
Source gene:
DENND4C
Class:
LIG_APCC_ABBA_1
Location:
1253:1258
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9865
ASA_SCORE:
99.1333
COIL:
0.3098
CONS_SCORE:
0.4247
DSS_SCORE:
0.6504
HELIX:
0.6775
FCONS_SCORE:
1.0777
RIG_SCORE:
0.6599
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1244R
TCGA-CG-5728
STAD
TCGA
MELHRE
LIG_APCC_ABBA_1
0.5278
p.S1244R
DO38619
STAD
ICGC
MELHRE
LIG_APCC_ABBA_1
0.5278
p.G1264V
TCGA-CS-5393
LGG
TCGA
MELHRE
LIG_APCC_ABBA_1
0.1667
p.G1264V
DO22129
LGG
ICGC
MELHRE
LIG_APCC_ABBA_1
0.1667
p.S1248C
DO230326
COCA
ICGC
MELHRE
LIG_APCC_ABBA_1
0.6389
p.S1251F
DO230336
COCA
ICGC
MELHRE
LIG_APCC_ABBA_1
0.2778
p.T1266A
DO234285
ESAD
ICGC
MELHRE
LIG_APCC_ABBA_1
0.1111
p.G1263R
SIDM00454
Rhabdomyosarcoma
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1944
p.G1263R
SIDM00654
Small Cell Lung Carcinoma
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1944
p.G1263R
SIDM00690
Head and Neck Carcinoma
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1944
p.G1263R
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1944
p.G1263R
SIDM00971
Breast Carcinoma
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1944
p.G1263R
SIDM00254
Neuroblastoma
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1944
p.G1263R
SIDM00863
Burkitt's Lymphoma
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1944
p.G1263R
SIDM00628
Breast Carcinoma
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1944
p.D1245G
SIDM01652
Non-Cancerous
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1111
p.D1245G
SIDM00187
Kidney Carcinoma
GDSC
MELHRE
LIG_APCC_ABBA_1
0.1111
Drug responses associated with DENND4C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MELHRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VZ89
DENN domain-containing protein 4C
LIG_APCC_ABBA_1
1253:1258
MELHRE
APC,CDC20,FZR1
0.9865
More...