DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
MKPYVD
Uniprot ID:
Q13813
Source protein:
Spectrin alpha chain, non-erythrocytic 1
Source gene:
SPTAN1
Class:
LIG_APCC_ABBA_1
Location:
2445:2450
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6355
ASA_SCORE:
63.8
COIL:
0.423
CONS_SCORE:
0.6674
DSS_SCORE:
0.2783
HELIX:
0.0428
FCONS_SCORE:
1.0593
RIG_SCORE:
0.7956
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E2460K
TCGA-A5-A0G1
UCEC
TCGA
MKPYVD
LIG_APCC_ABBA_1
0.0556
p.E2460K
DO42472
UCEC
ICGC
MKPYVD
LIG_APCC_ABBA_1
0.0556
p.C2446W
TCGA-AA-3713
COAD
TCGA
MKPYVD
LIG_APCC_ABBA_1
0.7
p.C2446W
DO8400
COAD
ICGC
MKPYVD
LIG_APCC_ABBA_1
0.7
p.G2456C
TCGA-D3-A2JL
SKCM
TCGA
MKPYVD
LIG_APCC_ABBA_1
0.1667
p.G2456C
DO47278
SKCM
ICGC
MKPYVD
LIG_APCC_ABBA_1
0.1667
p.R2440Q
TCGA-OR-A5KB
ACC
TCGA
MKPYVD
LIG_APCC_ABBA_1
0.6389
p.R2459H
DO233089
GACA
ICGC
MKPYVD
LIG_APCC_ABBA_1
0.0833
p.V2442I
DO233205
GACA
ICGC
MKPYVD
LIG_APCC_ABBA_1
0.25
p.E2460D
DO229009
LICA
ICGC
MKPYVD
LIG_APCC_ABBA_1
0.0556
p.D2444Y
DO50751
LICA
ICGC
MKPYVD
LIG_APCC_ABBA_1
0.3056
p.A2438V
DO222837
MELA
ICGC
MKPYVD
LIG_APCC_ABBA_1
0.1389
p.S2443N
SIDM00945
Colorectal Carcinoma
GDSC
MKPYVD
LIG_APCC_ABBA_1
0.2778
p.S2443N
CL-34
large_intestine
COSMIC
MKPYVD
LIG_APCC_ABBA_1
0.2778
p.E2454K
SIDM01111
Ewing's Sarcoma
GDSC
MKPYVD
LIG_APCC_ABBA_1
0.2222
p.E2454K
SK-ES-1
bone
COSMIC
MKPYVD
LIG_APCC_ABBA_1
0.2222
p.A2441V
SIDM00500
Colorectal Carcinoma
GDSC
MKPYVD
LIG_APCC_ABBA_1
0.2222
p.D2439N
ACH-000120
Neuroblastoma
CCLE
MKPYVD
LIG_APCC_ABBA_1
0.1667
p.D2439N
CHP-212
autonomic_ganglia
COSMIC
MKPYVD
LIG_APCC_ABBA_1
0.1667
p.F2460L
ACH-000914
Lymphoma
CCLE
MKPYVD
LIG_APCC_ABBA_1
0.0556
p.F2460L
HT
haematopoietic_and_lymphoid_tissue
COSMIC
MKPYVD
LIG_APCC_ABBA_1
0.0556
p.M2445T
ACH-000994
Endometrial/Uterine Cancer
CCLE
MKPYVD
LIG_APCC_ABBA_1
0.7423
p.F2440L
HT
haematopoietic_and_lymphoid_tissue
COSMIC
MKPYVD
LIG_APCC_ABBA_1
0.6389
p.D2444N
CHP-212
autonomic_ganglia
COSMIC
MKPYVD
LIG_APCC_ABBA_1
0.3056
p.F2445L
HT
haematopoietic_and_lymphoid_tissue
COSMIC
MKPYVD
LIG_APCC_ABBA_1
0.6981
Drug responses associated with SPTAN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MKPYVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13813
Spectrin alpha chain, non-erythrocytic 1
LIG_APCC_ABBA_1
2445:2450
MKPYVD
APC,CDC20,FZR1
0.6355
More...