DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MMLTPPSS
Uniprot ID:
O43474
Source protein:
Krueppel-like factor 4
Source gene:
KLF4
Class:
DEG_SCF_FBW7_1
Location:
391:398
E3 ligase:
FBXW7
DEGRON score:
0.9633
ASA_SCORE:
73.5125
COIL:
0.8479
CONS_SCORE:
0.1764
DSS_SCORE:
0.4773
HELIX:
0.0185
FCONS_SCORE:
-0.0039
RIG_SCORE:
0.6521
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G402C
TCGA-44-7667
LUAD
TCGA
MMLTPPSS
DEG_SCF_FBW7_1
0.2222
p.G402C
DO23830
LUAD
ICGC
MMLTPPSS
DEG_SCF_FBW7_1
0.2222
p.R383M
TCGA-AX-A2HC
UCEC
TCGA
MMLTPPSS
DEG_SCF_FBW7_1
0.1111
p.R383M
DO41572
UCEC
ICGC
MMLTPPSS
DEG_SCF_FBW7_1
0.1111
p.R390W
TCGA-DH-5141
LGG
TCGA
MMLTPPSS
DEG_SCF_FBW7_1
0.3056
p.R390W
DO22221
LGG
ICGC
MMLTPPSS
DEG_SCF_FBW7_1
0.3056
p.R390W
SIDM00336
Melanoma
GDSC
MMLTPPSS
DEG_SCF_FBW7_1
0.3056
p.R390W
ACH-000881
Skin Cancer
CCLE
MMLTPPSS
DEG_SCF_FBW7_1
0.3056
p.R390W
MEL-JUSO
skin
COSMIC
MMLTPPSS
DEG_SCF_FBW7_1
0.3056
p.A394T
TCGA-HU-8602
STAD
TCGA
MMLTPPSS
DEG_SCF_FBW7_1
0.7139
p.A394T
DO47829
STAD
ICGC
MMLTPPSS
DEG_SCF_FBW7_1
0.7139
p.R383T
DO1076
BRCA
ICGC
MMLTPPSS
DEG_SCF_FBW7_1
0.1111
p.T393N
DO228976
LICA
ICGC
MMLTPPSS
DEG_SCF_FBW7_1
0.7055
p.P389T
DO229029
LICA
ICGC
MMLTPPSS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with KLF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MMLTPPSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43474
Krueppel-like factor 4
DEG_SCF_FBW7_1
391:398
MMLTPPSS
FBXW7
0.9633
More...