DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MQTPGGS
Uniprot ID:
Q6ZV77
Source protein:
Putative uncharacterized protein LINC02908
Source gene:
LINC02908
Class:
DEG_SCF_FBW7_1
Location:
55:61
E3 ligase:
FBXW7
DEGRON score:
0.9893
ASA_SCORE:
61.7571
COIL:
0.7199
CONS_SCORE:
0
DSS_SCORE:
0.4444
HELIX:
0.0563
FCONS_SCORE:
0
RIG_SCORE:
0.6406
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R71C
TCGA-32-2491
GBM
TCGA
MQTPGGS
DEG_SCF_FBW7_1
0.0556
p.R71C
DO13354
GBM
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.0556
p.S61R
TCGA-33-AASJ
LUSC
TCGA
MQTPGGS
DEG_SCF_FBW7_1
0.8538
p.S61R
DO219131
LUSC
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.8538
p.E66D
TCGA-AJ-A3IA
UCEC
TCGA
MQTPGGS
DEG_SCF_FBW7_1
0.1944
p.E66D
DO43082
UCEC
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.1944
p.A67D
TCGA-AX-A1CE
UCEC
TCGA
MQTPGGS
DEG_SCF_FBW7_1
0.1667
p.A67D
DO42280
UCEC
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.1667
p.R64K
TCGA-CG-5723
STAD
TCGA
MQTPGGS
DEG_SCF_FBW7_1
0.25
p.R64K
DO38376
STAD
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.25
p.L51M
TCGA-FS-A1ZN
SKCM
TCGA
MQTPGGS
DEG_SCF_FBW7_1
0.2222
p.L51M
DO38165
SKCM
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.2222
p.R71S
TCGA-V1-A8WV
PRAD
TCGA
MQTPGGS
DEG_SCF_FBW7_1
0.0556
p.R71S
DO219363
PRAD
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.0556
p.D49A
DO222794
COCA
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.1667
p.S62T
DO234153
ESAD
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.75
p.S61I
DO229025
LICA
ICGC
MQTPGGS
DEG_SCF_FBW7_1
0.8453
Drug responses associated with LINC02908 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MQTPGGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZV77
Putative uncharacterized protein LINC02908
DEG_SCF_FBW7_1
55:61
MQTPGGS
FBXW7
0.9893
More...