DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MQVHQD
Uniprot ID:
Q12830
Source protein:
Nucleosome-remodeling factor subunit BPTF
Source gene:
BPTF
Class:
LIG_APCC_ABBA_1
Location:
2373:2378
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8821
ASA_SCORE:
111.3
COIL:
0.871
CONS_SCORE:
0.3205
DSS_SCORE:
0.7825
HELIX:
0.0758
FCONS_SCORE:
1.0218
RIG_SCORE:
0.6764
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2376L
TCGA-EE-A2A1
SKCM
TCGA
MQVHQD
LIG_APCC_ABBA_1
0.7582
p.P2376L
DO38045
SKCM
ICGC
MQVHQD
LIG_APCC_ABBA_1
0.7582
p.P2371L
ACH-000976
Bile Duct Cancer
CCLE
MQVHQD
LIG_APCC_ABBA_1
0.2778
Drug responses associated with BPTF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MQVHQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12830
Nucleosome-remodeling factor subunit BPTF
LIG_APCC_ABBA_1
2373:2378
MQVHQD
APC,CDC20,FZR1
0.8821
More...