DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MRGRLGSVD
Uniprot ID:
O60343
Source protein:
TBC1 domain family member 4
Source gene:
TBC1D4
Class:
DEG_APCC_DBOX_1
Location:
582:590
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9826
ASA_SCORE:
81.6111
COIL:
0.7238
CONS_SCORE:
0.2679
DSS_SCORE:
0.4888
HELIX:
0.1104
FCONS_SCORE:
0.8312
RIG_SCORE:
0.6783
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R577K
TCGA-A5-A2K5
UCEC
TCGA
MRGRLGSVD
DEG_APCC_DBOX_1
0.1944
p.R585W
TCGA-AP-A1DV
UCEC
TCGA
MRGRLGSVD
DEG_APCC_DBOX_1
0.7523
p.R585W
DO43186
UCEC
ICGC
MRGRLGSVD
DEG_APCC_DBOX_1
0.7523
p.R594W
TCGA-CG-5723
STAD
TCGA
MRGRLGSVD
DEG_APCC_DBOX_1
0.2222
p.R594W
DO38376
STAD
ICGC
MRGRLGSVD
DEG_APCC_DBOX_1
0.2222
p.R577M
TCGA-D3-A2JC
SKCM
TCGA
MRGRLGSVD
DEG_APCC_DBOX_1
0.1944
p.F575L
TCGA-DU-6392
LGG
TCGA
MRGRLGSVD
DEG_APCC_DBOX_1
0.1389
p.F575L
DO22237
LGG
ICGC
MRGRLGSVD
DEG_APCC_DBOX_1
0.1389
p.F575L
SIDM01611
Endometrial Carcinoma
GDSC
MRGRLGSVD
DEG_APCC_DBOX_1
0.1389
p.F575L
ACH-000996
Endometrial/Uterine Cancer
CCLE
MRGRLGSVD
DEG_APCC_DBOX_1
0.1389
p.L598I
DO228985
LICA
ICGC
MRGRLGSVD
DEG_APCC_DBOX_1
0.1111
p.L586I
DO229026
LICA
ICGC
MRGRLGSVD
DEG_APCC_DBOX_1
0.7174
p.N596K
DO229036
LICA
ICGC
MRGRLGSVD
DEG_APCC_DBOX_1
0.1667
p.R585Q
DO228138
PBCA
ICGC
MRGRLGSVD
DEG_APCC_DBOX_1
0.6218
p.R585G
DO233487
PRAD
ICGC
MRGRLGSVD
DEG_APCC_DBOX_1
0.6457
p.S597R
ACH-001389
Breast Cancer
CCLE
MRGRLGSVD
DEG_APCC_DBOX_1
0.5833
Drug responses associated with TBC1D4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MRGRLGSVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60343
TBC1 domain family member 4
DEG_APCC_DBOX_1
582:590
MRGRLGSVD
APC,CDC20,FZR1
0.9826
More...