DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
MRKRLYSLP
Uniprot ID:
Q9Y3Q4
Source protein:
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
Source gene:
HCN4
Class:
DEG_APCC_DBOX_1
Location:
8:16
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5595
ASA_SCORE:
85.7889
COIL:
0.5109
CONS_SCORE:
0.3915
DSS_SCORE:
0.4846
HELIX:
0.4576
FCONS_SCORE:
1.0513
RIG_SCORE:
0.749
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R11Q
TCGA-CK-4951
COAD
TCGA
MRKRLYSLP
DEG_APCC_DBOX_1
0.6218
p.R11Q
DO10582
COAD
ICGC
MRKRLYSLP
DEG_APCC_DBOX_1
0.6218
p.R11Q
ACH-001518
Endometrial/Uterine Cancer
CCLE
MRKRLYSLP
DEG_APCC_DBOX_1
0.6218
p.V19L
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
MRKRLYSLP
DEG_APCC_DBOX_1
0.25
Drug responses associated with HCN4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MRKRLYSLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y3Q4
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
DEG_APCC_DBOX_1
8:16
MRKRLYSLP
APC,CDC20,FZR1
0.5595
More...