DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CPH
CGC
Degron:
MRMHPE
Uniprot ID:
Q9NTG1
Source protein:
Polycystic kidney disease and receptor for egg jelly-related protein
Source gene:
PKDREJ
Class:
LIG_APCC_ABBA_1
Location:
1663:1668
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5958
ASA_SCORE:
93.25
COIL:
0.6152
CONS_SCORE:
0.3654
DSS_SCORE:
0.3678
HELIX:
0.294
FCONS_SCORE:
1.2512
RIG_SCORE:
0.7459
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1678L
TCGA-12-0778
GBM
TCGA
MRMHPE
LIG_APCC_ABBA_1
0.0556
p.V1678L
DO11411
GBM
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.0556
p.R1664C
TCGA-69-8253
LUAD
TCGA
MRMHPE
LIG_APCC_ABBA_1
0.719
p.R1664C
DO23637
LUAD
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.719
p.R1664C
SIDM01729
Endometrial Carcinoma
GDSC
MRMHPE
LIG_APCC_ABBA_1
0.719
p.R1664C
ACH-000909
Endometrial/Uterine Cancer
CCLE
MRMHPE
LIG_APCC_ABBA_1
0.719
p.I1658S
TCGA-AP-A059
UCEC
TCGA
MRMHPE
LIG_APCC_ABBA_1
0.1944
p.I1658S
DO41361
UCEC
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.1944
p.E1657K
TCGA-CV-7089
HNSC
TCGA
MRMHPE
LIG_APCC_ABBA_1
0.1667
p.E1657K
DO15158
HNSC
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.1667
p.D1661N
TCGA-D6-6516
HNSC
TCGA
MRMHPE
LIG_APCC_ABBA_1
0.2778
p.D1661N
DO15623
HNSC
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.2778
p.M1663K
TCGA-DZ-6135
KIRP
TCGA
MRMHPE
LIG_APCC_ABBA_1
0.8062
p.M1663K
DO20926
KIRP
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.8062
p.R1672K
TCGA-QB-A6FS
SKCM
TCGA
MRMHPE
LIG_APCC_ABBA_1
0.2222
p.R1672K
DO48654
SKCM
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.2222
p.R1659G
DO233210
GACA
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.2222
p.V1678I
DO233737
GACA
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.0556
p.V1678I
ACH-001850
Gallbladder Cancer
CCLE
MRMHPE
LIG_APCC_ABBA_1
0.0556
p.E1657D
DO50806
LIRI
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.1667
p.L1660F
DO222572
MELA
ICGC
MRMHPE
LIG_APCC_ABBA_1
0.25
p.R1664H
SIDM00656
Burkitt's Lymphoma
GDSC
MRMHPE
LIG_APCC_ABBA_1
0.7133
p.R1664H
ACH-000944
Lymphoma
CCLE
MRMHPE
LIG_APCC_ABBA_1
0.7133
p.R1664H
NAMALWA
haematopoietic_and_lymphoid_tissue
COSMIC
MRMHPE
LIG_APCC_ABBA_1
0.7133
p.H1666Y
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
MRMHPE
LIG_APCC_ABBA_1
0.6118
p.H1666Y
ACH-000843
Lung Cancer
CCLE
MRMHPE
LIG_APCC_ABBA_1
0.6118
p.H1666Y
HARA
lung
COSMIC
MRMHPE
LIG_APCC_ABBA_1
0.6118
Drug responses associated with PKDREJ mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MRMHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NTG1
Polycystic kidney disease and receptor for egg jelly-related protein
LIG_APCC_ABBA_1
1663:1668
MRMHPE
APC,CDC20,FZR1
0.5958
More...