DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MRPDLSKMM
Uniprot ID:
Q9HCK8
Source protein:
Chromodomain-helicase-DNA-binding protein 8
Source gene:
CHD8
Class:
DEG_APCC_DBOX_1
Location:
2422:2430
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6839
ASA_SCORE:
86.8444
COIL:
0.5104
CONS_SCORE:
0.3139
DSS_SCORE:
0.6352
HELIX:
0.4788
FCONS_SCORE:
0.9267
RIG_SCORE:
0.7461
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R2420C
TCGA-FI-A2D0
UCEC
TCGA
MRPDLSKMM
DEG_APCC_DBOX_1
0.2778
p.M2433V
SIDM00661
B-Cell Non-Hodgkin's Lymphoma
GDSC
MRPDLSKMM
DEG_APCC_DBOX_1
0.25
p.M2433V
ACH-000914
Lymphoma
CCLE
MRPDLSKMM
DEG_APCC_DBOX_1
0.25
p.M2433V
HT
haematopoietic_and_lymphoid_tissue
COSMIC
MRPDLSKMM
DEG_APCC_DBOX_1
0.25
p.Q2434R
SIDM00151
Ovarian Carcinoma
GDSC
MRPDLSKMM
DEG_APCC_DBOX_1
0.2222
p.Q2434R
ACH-000966
Ovarian Cancer
CCLE
MRPDLSKMM
DEG_APCC_DBOX_1
0.2222
p.Q2434R
IGROV-1
ovary
COSMIC
MRPDLSKMM
DEG_APCC_DBOX_1
0.2222
Drug responses associated with CHD8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MRPDLSKMM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HCK8
Chromodomain-helicase-DNA-binding protein 8
DEG_APCC_DBOX_1
2422:2430
MRPDLSKMM
APC,CDC20,FZR1
0.6839
More...