DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MRQTLPLLL
Uniprot ID:
Q8WUT4
Source protein:
Leucine-rich repeat neuronal protein 4
Source gene:
LRRN4
Class:
DEG_APCC_DBOX_1
Location:
1:9
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9164
ASA_SCORE:
103.2444
COIL:
0.6228
CONS_SCORE:
0.5951
DSS_SCORE:
0.4559
HELIX:
0.2888
FCONS_SCORE:
1.8601
RIG_SCORE:
0.8473
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R2Q
TCGA-AJ-A3EK
UCEC
TCGA
MRQTLPLLL
DEG_APCC_DBOX_1
0.7329
p.R2Q
DO41584
UCEC
ICGC
MRQTLPLLL
DEG_APCC_DBOX_1
0.7329
p.R14C
TCGA-CD-8527
STAD
TCGA
MRQTLPLLL
DEG_APCC_DBOX_1
0.1944
p.R14C
DO227996
COCA
ICGC
MRQTLPLLL
DEG_APCC_DBOX_1
0.1944
p.R14C
DO47739
STAD
ICGC
MRQTLPLLL
DEG_APCC_DBOX_1
0.1944
p.A18S
DO233619
GACA
ICGC
MRQTLPLLL
DEG_APCC_DBOX_1
0.0833
p.A18V
DO233619
GACA
ICGC
MRQTLPLLL
DEG_APCC_DBOX_1
0.0833
p.R14S
DO229028
LICA
ICGC
MRQTLPLLL
DEG_APCC_DBOX_1
0.1944
p.A18E
DO229032
LICA
ICGC
MRQTLPLLL
DEG_APCC_DBOX_1
0.0833
p.P15S
DO37827
SKCM
ICGC
MRQTLPLLL
DEG_APCC_DBOX_1
0.1667
p.S16N
SIDM02059
Colorectal Carcinoma
GDSC
MRQTLPLLL
DEG_APCC_DBOX_1
0.1389
p.R14H
ACH-000930
Breast Cancer
CCLE
MRQTLPLLL
DEG_APCC_DBOX_1
0.1944
p.P15H
ACH-001036
Leukemia
CCLE
MRQTLPLLL
DEG_APCC_DBOX_1
0.1667
Drug responses associated with LRRN4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MRQTLPLLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WUT4
Leucine-rich repeat neuronal protein 4
DEG_APCC_DBOX_1
1:9
MRQTLPLLL
APC,CDC20,FZR1
0.9164
More...