DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MRTSLQAVA
Uniprot ID:
Q3MJ13
Source protein:
WD repeat-containing protein 72
Source gene:
WDR72
Class:
DEG_APCC_DBOX_1
Location:
1:9
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8498
ASA_SCORE:
63.9111
COIL:
0.5488
CONS_SCORE:
0.4942
DSS_SCORE:
0.6157
HELIX:
0.0119
FCONS_SCORE:
0.8768
RIG_SCORE:
0.8091
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q13E
TCGA-22-5471
LUSC
TCGA
MRTSLQAVA
DEG_APCC_DBOX_1
0.2222
p.Q13E
DO27500
LUSC
ICGC
MRTSLQAVA
DEG_APCC_DBOX_1
0.2222
p.S19N
TCGA-BR-7703
STAD
TCGA
MRTSLQAVA
DEG_APCC_DBOX_1
0.0556
p.S19N
DO38232
STAD
ICGC
MRTSLQAVA
DEG_APCC_DBOX_1
0.0556
p.S19N
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
MRTSLQAVA
DEG_APCC_DBOX_1
0.0556
p.S4F
TCGA-EE-A29S
SKCM
TCGA
MRTSLQAVA
DEG_APCC_DBOX_1
0.7982
p.S4F
DO220878
MELA
ICGC
MRTSLQAVA
DEG_APCC_DBOX_1
0.7982
p.S4F
DO37936
SKCM
ICGC
MRTSLQAVA
DEG_APCC_DBOX_1
0.7982
p.G12R
TCGA-EE-A3JD
SKCM
TCGA
MRTSLQAVA
DEG_APCC_DBOX_1
0.25
p.G12R
DO50299
SKCM
ICGC
MRTSLQAVA
DEG_APCC_DBOX_1
0.25
p.W11C
TCGA-ER-A19P
SKCM
TCGA
MRTSLQAVA
DEG_APCC_DBOX_1
0.2778
p.W11C
DO47623
SKCM
ICGC
MRTSLQAVA
DEG_APCC_DBOX_1
0.2778
p.S4Y
TCGA-XQ-A8TA
PRAD
TCGA
MRTSLQAVA
DEG_APCC_DBOX_1
0.712
p.S4Y
DO223662
PRAD
ICGC
MRTSLQAVA
DEG_APCC_DBOX_1
0.712
p.K14T
DO223124
ESCA
ICGC
MRTSLQAVA
DEG_APCC_DBOX_1
0.3056
p.Q6K
DO228424
MALY
ICGC
MRTSLQAVA
DEG_APCC_DBOX_1
0.5833
Drug responses associated with WDR72 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MRTSLQAVA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q3MJ13
WD repeat-containing protein 72
DEG_APCC_DBOX_1
1:9
MRTSLQAVA
APC,CDC20,FZR1
0.8498
More...