DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MRWFLPDLP
Uniprot ID:
Q9NS15
Source protein:
Latent-transforming growth factor beta-binding protein 3
Source gene:
LTBP3
Class:
DEG_APCC_DBOX_1
Location:
551:559
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9444
ASA_SCORE:
78.0778
COIL:
0.8073
CONS_SCORE:
0.4055
DSS_SCORE:
0.533
HELIX:
0.0977
FCONS_SCORE:
0.8244
RIG_SCORE:
0.7401
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P556S
TCGA-DD-A4NJ
LIHC
TCGA
MRWFLPDLP
DEG_APCC_DBOX_1
0.5641
p.P556S
DO44873
LIHC
ICGC
MRWFLPDLP
DEG_APCC_DBOX_1
0.5641
p.S563R
DO228978
LICA
ICGC
MRWFLPDLP
DEG_APCC_DBOX_1
0.2222
p.S563R
DO229027
LICA
ICGC
MRWFLPDLP
DEG_APCC_DBOX_1
0.2222
p.E541D
SIDM02015
Colorectal Carcinoma
GDSC
MRWFLPDLP
DEG_APCC_DBOX_1
0.0556
p.P549A
ACH-000437
Brain Cancer
CCLE
MRWFLPDLP
DEG_APCC_DBOX_1
0.2778
Drug responses associated with LTBP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MRWFLPDLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NS15
Latent-transforming growth factor beta-binding protein 3
DEG_APCC_DBOX_1
551:559
MRWFLPDLP
APC,CDC20,FZR1
0.9444
More...