DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
MSLHFD
Uniprot ID:
A6H8M9
Source protein:
Cadherin-related family member 4
Source gene:
CDHR4
Class:
LIG_APCC_ABBA_1
Location:
759:764
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.801
ASA_SCORE:
68.1333
COIL:
0.3773
CONS_SCORE:
0.8574
DSS_SCORE:
0.5213
HELIX:
0.006
FCONS_SCORE:
1.0998
RIG_SCORE:
0.7255
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A754V
TCGA-A7-A13E
BRCA
TCGA
MSLHFD
LIG_APCC_ABBA_1
0.1944
p.A754V
DO2659
BRCA
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.1944
p.S756N
TCGA-AA-3864
COAD
TCGA
MSLHFD
LIG_APCC_ABBA_1
0.25
p.S756N
DO8490
COAD
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.25
p.G773R
TCGA-AJ-A3BH
UCEC
TCGA
MSLHFD
LIG_APCC_ABBA_1
0.0833
p.G773R
DO41638
UCEC
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.0833
p.Q768H
TCGA-AP-A059
UCEC
TCGA
MSLHFD
LIG_APCC_ABBA_1
0.2222
p.Q768H
DO41361
UCEC
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.2222
p.A754T
TCGA-E6-A1LX
UCEC
TCGA
MSLHFD
LIG_APCC_ABBA_1
0.1944
p.A754T
DO41020
UCEC
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.1944
p.G765V
TCGA-EO-A3KX
UCEC
TCGA
MSLHFD
LIG_APCC_ABBA_1
0.3056
p.G765V
DO219774
UCEC
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.3056
p.F763L
TCGA-FI-A2D5
UCEC
TCGA
MSLHFD
LIG_APCC_ABBA_1
0.587
p.F763L
DO41331
UCEC
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.587
p.V758A
TCGA-FI-A2D5
UCEC
TCGA
MSLHFD
LIG_APCC_ABBA_1
0.3056
p.V758A
DO41331
UCEC
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.3056
p.S756I
TCGA-FI-A2D5
UCEC
TCGA
MSLHFD
LIG_APCC_ABBA_1
0.25
p.S756I
DO41331
UCEC
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.25
p.A767V
DO230342
COCA
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.25
p.M759V
DO229221
THCA
ICGC
MSLHFD
LIG_APCC_ABBA_1
0.6097
Drug responses associated with CDHR4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MSLHFD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6H8M9
Cadherin-related family member 4
LIG_APCC_ABBA_1
759:764
MSLHFD
APC,CDC20,FZR1
0.801
More...