DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MSLYDD
Uniprot ID:
Q96I25
Source protein:
Splicing factor 45
Source gene:
RBM17
Class:
LIG_APCC_ABBA_1
Location:
1:6
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9989
ASA_SCORE:
53.6333
COIL:
0.741
CONS_SCORE:
0.5016
DSS_SCORE:
0.7148
HELIX:
0.1743
FCONS_SCORE:
1.3364
RIG_SCORE:
0.7885
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K15T
DO229347
LAML
ICGC
MSLYDD
LIG_APCC_ABBA_1
0.1944
p.G8V
DO229027
LICA
ICGC
MSLYDD
LIG_APCC_ABBA_1
0.2778
p.G8V
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
MSLYDD
LIG_APCC_ABBA_1
0.2778
p.G8V
ACH-000945
Lung Cancer
CCLE
MSLYDD
LIG_APCC_ABBA_1
0.2778
p.G8V
NCI-H650
lung
COSMIC
MSLYDD
LIG_APCC_ABBA_1
0.2778
p.T16R
ACH-000554
Breast Cancer
CCLE
MSLYDD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with RBM17 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MSLYDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96I25
Splicing factor 45
LIG_APCC_ABBA_1
1:6
MSLYDD
APC,CDC20,FZR1
0.9989
More...