DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MSMFSD
Uniprot ID:
P57740
Source protein:
Nuclear pore complex protein Nup107
Source gene:
NUP107
Class:
LIG_APCC_ABBA_1
Location:
152:157
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9873
ASA_SCORE:
51.3667
COIL:
0.084
CONS_SCORE:
0.3521
DSS_SCORE:
0.244
HELIX:
0.9102
FCONS_SCORE:
1.3999
RIG_SCORE:
0.7913
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E143D
TCGA-CG-4305
STAD
TCGA
MSMFSD
LIG_APCC_ABBA_1
0.0833
p.M152I
TCGA-FD-A6TG
BLCA
TCGA
MSMFSD
LIG_APCC_ABBA_1
0.6507
p.R166H
DO51883
BLCA
ICGC
MSMFSD
LIG_APCC_ABBA_1
0.0833
p.R166H
SNU-398
liver
COSMIC
MSMFSD
LIG_APCC_ABBA_1
0.0833
p.V162I
DO44178
BRCA
ICGC
MSMFSD
LIG_APCC_ABBA_1
0.1944
p.H151Y
DO234230
ESAD
ICGC
MSMFSD
LIG_APCC_ABBA_1
0.3056
p.V165F
DO229045
LICA
ICGC
MSMFSD
LIG_APCC_ABBA_1
0.1111
p.E147D
DO45035
LINC
ICGC
MSMFSD
LIG_APCC_ABBA_1
0.1944
p.T149A
DO24218
LUAD
ICGC
MSMFSD
LIG_APCC_ABBA_1
0.25
p.R166C
DO222415
MELA
ICGC
MSMFSD
LIG_APCC_ABBA_1
0.0833
p.R156L
DO28923
OV
ICGC
MSMFSD
LIG_APCC_ABBA_1
0.8428
p.R156L
HCC1428
breast
COSMIC
MSMFSD
LIG_APCC_ABBA_1
0.8428
p.T149N
DO51407
PRAD
ICGC
MSMFSD
LIG_APCC_ABBA_1
0.25
p.M152V
SIDM00217
Colorectal Carcinoma
GDSC
MSMFSD
LIG_APCC_ABBA_1
0.6097
p.F155L
SIDM00217
Colorectal Carcinoma
GDSC
MSMFSD
LIG_APCC_ABBA_1
0.6981
p.Q155H
HCT-15
large_intestine
COSMIC
MSMFSD
LIG_APCC_ABBA_1
0.7582
p.P167L
TMK-1
stomach
COSMIC
MSMFSD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with NUP107 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MSMFSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P57740
Nuclear pore complex protein Nup107
LIG_APCC_ABBA_1
152:157
MSMFSD
APC,CDC20,FZR1
0.9873
More...