DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MSVYPE
Uniprot ID:
O75603
Source protein:
Chorion-specific transcription factor GCMb
Source gene:
GCM2
Class:
LIG_APCC_ABBA_1
Location:
423:428
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.943
ASA_SCORE:
59.9167
COIL:
0.7415
CONS_SCORE:
0.4542
DSS_SCORE:
0.4701
HELIX:
0.1102
FCONS_SCORE:
1.1311
RIG_SCORE:
0.6898
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P427T
TCGA-64-1679
LUAD
TCGA
MSVYPE
LIG_APCC_ABBA_1
0.5919
p.P427T
DO26200
LUAD
ICGC
MSVYPE
LIG_APCC_ABBA_1
0.5919
p.N415T
TCGA-AX-A2HD
UCEC
TCGA
MSVYPE
LIG_APCC_ABBA_1
0.1111
p.N415T
DO42608
UCEC
ICGC
MSVYPE
LIG_APCC_ABBA_1
0.1111
p.P427A
TCGA-BH-A0WA
BRCA
TCGA
MSVYPE
LIG_APCC_ABBA_1
0.6392
p.P427A
DO2897
BRCA
ICGC
MSVYPE
LIG_APCC_ABBA_1
0.6392
p.P433S
TCGA-EB-A553
SKCM
TCGA
MSVYPE
LIG_APCC_ABBA_1
0.1944
p.P433S
DO47329
SKCM
ICGC
MSVYPE
LIG_APCC_ABBA_1
0.1944
p.P429L
TCGA-EE-A2MU
SKCM
TCGA
MSVYPE
LIG_APCC_ABBA_1
0.3056
p.P429L
TCGA-W3-A824
SKCM
TCGA
MSVYPE
LIG_APCC_ABBA_1
0.3056
p.P429L
DO37436
SKCM
ICGC
MSVYPE
LIG_APCC_ABBA_1
0.3056
p.P429L
DO51271
SKCM
ICGC
MSVYPE
LIG_APCC_ABBA_1
0.3056
p.P433R
TCGA-EE-A3JD
SKCM
TCGA
MSVYPE
LIG_APCC_ABBA_1
0.1944
p.P433R
DO50299
SKCM
ICGC
MSVYPE
LIG_APCC_ABBA_1
0.1944
p.P432S
TCGA-FS-A1ZA
SKCM
TCGA
MSVYPE
LIG_APCC_ABBA_1
0.2222
p.P432S
DO37551
SKCM
ICGC
MSVYPE
LIG_APCC_ABBA_1
0.2222
p.G422E
DO220886
MELA
ICGC
MSVYPE
LIG_APCC_ABBA_1
0.3056
p.N415S
SIDM01559
Melanoma
GDSC
MSVYPE
LIG_APCC_ABBA_1
0.1111
Drug responses associated with GCM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MSVYPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75603
Chorion-specific transcription factor GCMb
LIG_APCC_ABBA_1
423:428
MSVYPE
APC,CDC20,FZR1
0.943
More...