DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MSVYSE
Uniprot ID:
Q8TDW5
Source protein:
Synaptotagmin-like protein 5
Source gene:
SYTL5
Class:
LIG_APCC_ABBA_1
Location:
392:397
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5661
ASA_SCORE:
74.6167
COIL:
0.5125
CONS_SCORE:
0.7088
DSS_SCORE:
0.231
HELIX:
0.1712
FCONS_SCORE:
1.1819
RIG_SCORE:
0.7772
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L383I
TCGA-06-5416
GBM
TCGA
MSVYSE
LIG_APCC_ABBA_1
0.0833
p.L383I
TCGA-69-7980
LUAD
TCGA
MSVYSE
LIG_APCC_ABBA_1
0.0833
p.L383I
DO10880
GBM
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.0833
p.L383I
DO23678
LUAD
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.0833
p.L383Q
TCGA-69-7980
LUAD
TCGA
MSVYSE
LIG_APCC_ABBA_1
0.0833
p.L383Q
DO23678
LUAD
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.0833
p.D392Y
TCGA-A5-A0G1
UCEC
TCGA
MSVYSE
LIG_APCC_ABBA_1
0.7325
p.D392Y
DO42472
UCEC
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.7325
p.K394T
TCGA-A5-A0G1
UCEC
TCGA
MSVYSE
LIG_APCC_ABBA_1
0.7306
p.K394T
DO42472
UCEC
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.7306
p.G382D
TCGA-AX-A0J1
UCEC
TCGA
MSVYSE
LIG_APCC_ABBA_1
0.0556
p.G382D
DO41199
UCEC
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.0556
p.T407N
TCGA-AX-A1CE
UCEC
TCGA
MSVYSE
LIG_APCC_ABBA_1
0.0556
p.T407N
DO42280
UCEC
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.0556
p.S390G
DO48457
BLCA
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.2778
p.V394I
DO9346
COAD
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.5965
p.D404H
DO233025
GACA
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.1389
p.N389K
DO12100
GBM
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.25
p.S386I
DO15014
HNSC
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.1667
p.G390V
DO229036
LICA
ICGC
MSVYSE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with SYTL5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MSVYSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TDW5
Synaptotagmin-like protein 5
LIG_APCC_ABBA_1
392:397
MSVYSE
APC,CDC20,FZR1
0.5661
More...