DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MTPGLT
Uniprot ID:
Q13428
Source protein:
Treacle protein
Source gene:
TCOF1
Class:
DEG_SCF_FBW7_1
Location:
1207:1212
E3 ligase:
FBXW7
DEGRON score:
0.9908
ASA_SCORE:
87.7667
COIL:
0.9567
CONS_SCORE:
0.448
DSS_SCORE:
0.5566
HELIX:
0.0112
FCONS_SCORE:
0.9123
RIG_SCORE:
0.6637
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y1206D
TCGA-AG-A002
READ
TCGA
MTPGLT
DEG_SCF_FBW7_1
0.75
p.S1199F
TCGA-EE-A2MS
SKCM
TCGA
MTPGLT
DEG_SCF_FBW7_1
0.5556
p.A1199V
DO2186
BRCA
ICGC
MTPGLT
DEG_SCF_FBW7_1
0.5556
p.A1200T
DO230312
COCA
ICGC
MTPGLT
DEG_SCF_FBW7_1
0.1389
p.D1205H
DO50828
LICA
ICGC
MTPGLT
DEG_SCF_FBW7_1
0.2778
p.A1199T
DO227546
PBCA
ICGC
MTPGLT
DEG_SCF_FBW7_1
0.5556
p.P1221H
DO47491
SKCM
ICGC
MTPGLT
DEG_SCF_FBW7_1
0.0833
p.A1213V
DO38328
STAD
ICGC
MTPGLT
DEG_SCF_FBW7_1
0.3056
p.T1212I
SIDM00854
Burkitt's Lymphoma
GDSC
MTPGLT
DEG_SCF_FBW7_1
0.7078
p.T1212I
GA-10
haematopoietic_and_lymphoid_tissue
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.7078
p.M1207K
SIDM00651
Non-Small Cell Lung Carcinoma
GDSC
MTPGLT
DEG_SCF_FBW7_1
0.8062
p.M1207K
SIDM00826
Colorectal Carcinoma
GDSC
MTPGLT
DEG_SCF_FBW7_1
0.8062
p.M1207K
SIDM00823
Colorectal Carcinoma
GDSC
MTPGLT
DEG_SCF_FBW7_1
0.8062
p.S1201F
SIDM00532
Glioma
GDSC
MTPGLT
DEG_SCF_FBW7_1
0.1667
p.S1201F
MOG-G-CCM
central_nervous_system
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.1667
p.Q1214R
ACH-000427
Gastric Cancer
CCLE
MTPGLT
DEG_SCF_FBW7_1
0.2778
p.Q1214R
NCI-N87
stomach
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.2778
p.L1219F
ACH-000679
Esophageal Cancer
CCLE
MTPGLT
DEG_SCF_FBW7_1
0.1389
p.L1219F
OE19
oesophagus
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.1389
p.L1198P
ACH-000998
Colon/Colorectal Cancer
CCLE
MTPGLT
DEG_SCF_FBW7_1
0.0833
p.L1198P
CW-2
large_intestine
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.0833
p.D1202E
ACH-001081
Colon/Colorectal Cancer
CCLE
MTPGLT
DEG_SCF_FBW7_1
0.1944
p.D1202E
HCC2998
large_intestine
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.1944
p.T1213I
GA-10
haematopoietic_and_lymphoid_tissue
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.3056
p.Q1213R
NCI-N87
stomach
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.3056
p.D1201E
HCC2998
large_intestine
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.1667
p.L1197P
CW-2
large_intestine
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.0556
p.L1218F
OE19
oesophagus
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.1667
p.S1202F
MOG-G-CCM
central_nervous_system
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.1944
p.Q1209R
CW-2
large_intestine
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.7329
p.Q1208R
CW-2
large_intestine
COSMIC
MTPGLT
DEG_SCF_FBW7_1
0.7329
Drug responses associated with TCOF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MTPGLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13428
Treacle protein
DEG_SCF_FBW7_1
1207:1212
MTPGLT
FBXW7
0.9908
More...