DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NCDTGE
Uniprot ID:
Q92540
Source protein:
Nonsense-mediated mRNA decay factor SMG7
Source gene:
SMG7
Class:
DEG_Kelch_Keap1_1
Location:
536:541
E3 ligase:
KEAP1
DEGRON score:
0.9942
ASA_SCORE:
93.1833
COIL:
0.922
CONS_SCORE:
0.3583
DSS_SCORE:
0.4736
HELIX:
0.052
FCONS_SCORE:
0.9946
RIG_SCORE:
0.6906
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R531Q
TCGA-A8-A06Q
BRCA
TCGA
NCDTGE
DEG_Kelch_Keap1_1
0.1944
p.R531Q
TCGA-EO-A22X
UCEC
TCGA
NCDTGE
DEG_Kelch_Keap1_1
0.1944
p.R531Q
ACH-000993
Endometrial/Uterine Cancer
CCLE
NCDTGE
DEG_Kelch_Keap1_1
0.1944
p.N532H
TCGA-AY-A54L
COAD
TCGA
NCDTGE
DEG_Kelch_Keap1_1
0.2222
p.D538G
TCGA-KK-A59V
PRAD
TCGA
NCDTGE
DEG_Kelch_Keap1_1
0.7198
p.A545T
DO219749
CESC
ICGC
NCDTGE
DEG_Kelch_Keap1_1
0.2222
p.A546S
DO229028
LICA
ICGC
NCDTGE
DEG_Kelch_Keap1_1
0.1944
p.G534R
DO27468
LUSC
ICGC
NCDTGE
DEG_Kelch_Keap1_1
0.7222
p.L535M
DO36556
READ
ICGC
NCDTGE
DEG_Kelch_Keap1_1
0.3056
p.S534G
SIDM00047
Non-Small Cell Lung Carcinoma
GDSC
NCDTGE
DEG_Kelch_Keap1_1
0.7222
p.S534G
ACH-002102
Lung Cancer
CCLE
NCDTGE
DEG_Kelch_Keap1_1
0.7222
p.S534G
EMC-BAC-2
lung
COSMIC
NCDTGE
DEG_Kelch_Keap1_1
0.7222
p.V545A
SIDM00221
Melanoma
GDSC
NCDTGE
DEG_Kelch_Keap1_1
0.2222
p.V545A
ACH-002388
Skin Cancer
CCLE
NCDTGE
DEG_Kelch_Keap1_1
0.2222
p.N536K
ACH-001061
Colon/Colorectal Cancer
CCLE
NCDTGE
DEG_Kelch_Keap1_1
0.6918
Drug responses associated with SMG7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NCDTGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92540
Nonsense-mediated mRNA decay factor SMG7
DEG_Kelch_Keap1_1
536:541
NCDTGE
KEAP1
0.9942
More...