DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NIDKTPKK
Uniprot ID:
O75152
Source protein:
Zinc finger CCCH domain-containing protein 11A
Source gene:
ZC3H11A
Class:
DEG_SCF_SKP2-CKS1_1
Location:
317:324
E3 ligase:
SKP2,CSK1
DEGRON score:
0.984
ASA_SCORE:
109.6375
COIL:
0.8996
CONS_SCORE:
0.4402
DSS_SCORE:
0.6253
HELIX:
0.0605
FCONS_SCORE:
0.855
RIG_SCORE:
0.7063
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K332N
TCGA-17-Z031
LUAD
TCGA
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.5556
p.E333V
TCGA-18-3421
LUSC
TCGA
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.0833
p.E333V
DO27652
LUSC
ICGC
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.0833
p.S330F
TCGA-86-A4JF
LUAD
TCGA
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.1667
p.S330F
DO45317
LUAD
ICGC
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.1667
p.K323N
TCGA-AG-A002
READ
TCGA
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.5806
p.K320N
TCGA-BR-8680
STAD
TCGA
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.5806
p.K320N
DO47769
STAD
ICGC
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.5806
p.K324E
TCGA-DU-7015
LGG
TCGA
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.7022
p.K324E
DO22619
LGG
ICGC
NIDKTPKK
DEG_SCF_SKP2-CKS1_1
0.7022
Drug responses associated with ZC3H11A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NIDKTPKK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75152
Zinc finger CCCH domain-containing protein 11A
DEG_SCF_SKP2-CKS1_1
317:324
NIDKTPKK
SKP2,CSK1
0.984
More...