DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
NNAAGYSCGP
Uniprot ID:
Q12923
Source protein:
Tyrosine-protein phosphatase non-receptor type 13
Source gene:
PTPN13
Class:
CBL_PTK
Location:
2076:2085
E3 ligase:
CBL
DEGRON score:
0.5397
ASA_SCORE:
57.02
COIL:
0.7855
CONS_SCORE:
0.3176
DSS_SCORE:
0.4158
HELIX:
0.1287
FCONS_SCORE:
0.8811
RIG_SCORE:
0.6947
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E2072K
TCGA-17-Z026
LUAD
TCGA
NNAAGYSCGP
CBL_PTK
0.2222
p.L2077I
TCGA-A5-A2K5
UCEC
TCGA
NNAAGYSCGP
CBL_PTK
0.7174
p.L2077I
TCGA-EO-A3B0
UCEC
TCGA
NNAAGYSCGP
CBL_PTK
0.7174
p.E2080K
TCGA-AX-A05Z
UCEC
TCGA
NNAAGYSCGP
CBL_PTK
0.7022
p.E2080K
TCGA-GN-A8LK
SKCM
TCGA
NNAAGYSCGP
CBL_PTK
0.7022
p.E2080K
ACH-001569
Skin Cancer
CCLE
NNAAGYSCGP
CBL_PTK
0.7022
p.A2084S
TCGA-BS-A0TC
UCEC
TCGA
NNAAGYSCGP
CBL_PTK
0.7588
p.G2089C
TCGA-FS-A1Z0
SKCM
TCGA
NNAAGYSCGP
CBL_PTK
0.3333
p.F2086L
DO220484
KICH
ICGC
NNAAGYSCGP
CBL_PTK
0.3056
p.G2082R
DO222908
MELA
ICGC
NNAAGYSCGP
CBL_PTK
0.7568
p.Y2088D
DO43154
UCEC
ICGC
NNAAGYSCGP
CBL_PTK
0.25
p.F2086S
DO43755
UCEC
ICGC
NNAAGYSCGP
CBL_PTK
0.3056
p.M2095I
SIDM00381
Cervical Carcinoma
GDSC
NNAAGYSCGP
CBL_PTK
0.0556
p.M2095I
SKG-IIIa
cervix
COSMIC
NNAAGYSCGP
CBL_PTK
0.0556
p.C2088R
SIDM00228
Thyroid Gland Carcinoma
GDSC
NNAAGYSCGP
CBL_PTK
0.25
p.C2088R
ACH-000897
Thyroid Cancer
CCLE
NNAAGYSCGP
CBL_PTK
0.25
p.M2090I
ACH-002020
Cervical Cancer
CCLE
NNAAGYSCGP
CBL_PTK
0.1944
p.M2090I
SKG-IIIa
cervix
COSMIC
NNAAGYSCGP
CBL_PTK
0.1944
p.Q2092H
COR-L88
lung
COSMIC
NNAAGYSCGP
CBL_PTK
0.1389
p.D2086G
NCI-H1299
lung
COSMIC
NNAAGYSCGP
CBL_PTK
0.3056
p.M2071I
SKG-IIIa
cervix
COSMIC
NNAAGYSCGP
CBL_PTK
0.1944
p.G2087C
HAL-01
haematopoietic_and_lymphoid_tissue
COSMIC
NNAAGYSCGP
CBL_PTK
0.2778
Drug responses associated with PTPN13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NNAAGYSCGP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12923
Tyrosine-protein phosphatase non-receptor type 13
CBL_PTK
2076:2085
NNAAGYSCGP
CBL
0.5397
More...