DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NNNNRSYSNIP
Uniprot ID:
Q15788
Source protein:
Nuclear receptor coactivator 1
Source gene:
NCOA1
Class:
CBL_PTK
Location:
527:537
E3 ligase:
CBL
DEGRON score:
0.916
ASA_SCORE:
89.4545
COIL:
0.9205
CONS_SCORE:
0.5126
DSS_SCORE:
0.4786
HELIX:
0.0493
FCONS_SCORE:
0.9456
RIG_SCORE:
0.6997
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S540Y
TCGA-06-5416
GBM
TCGA
NNNNRSYSNIP
CBL_PTK
0.25
p.S540Y
DO10880
GBM
ICGC
NNNNRSYSNIP
CBL_PTK
0.25
p.N545D
TCGA-CV-7097
HNSC
TCGA
NNNNRSYSNIP
CBL_PTK
0.1111
p.N545D
DO14886
HNSC
ICGC
NNNNRSYSNIP
CBL_PTK
0.1111
p.P518S
TCGA-CV-7568
HNSC
TCGA
NNNNRSYSNIP
CBL_PTK
0.0833
p.P518S
DO14160
HNSC
ICGC
NNNNRSYSNIP
CBL_PTK
0.0833
p.V519I
TCGA-DK-A3WW
BLCA
TCGA
NNNNRSYSNIP
CBL_PTK
0.1111
p.V519I
DO481
BLCA
ICGC
NNNNRSYSNIP
CBL_PTK
0.1111
p.V519I
SIDM01107
Melanoma
GDSC
NNNNRSYSNIP
CBL_PTK
0.1111
p.V519I
ACH-000465
Skin Cancer
CCLE
NNNNRSYSNIP
CBL_PTK
0.1111
p.V519I
SK-MEL-1
skin
COSMIC
NNNNRSYSNIP
CBL_PTK
0.1111
p.R531Q
TCGA-EO-A22X
UCEC
TCGA
NNNNRSYSNIP
CBL_PTK
0.6218
p.R531Q
DO43907
UCEC
ICGC
NNNNRSYSNIP
CBL_PTK
0.6218
p.N527D
TCGA-PK-A5HB
ACC
TCGA
NNNNRSYSNIP
CBL_PTK
0.5821
p.E546K
DO224768
BRCA
ICGC
NNNNRSYSNIP
CBL_PTK
0.0833
p.N535S
DO222762
COCA
ICGC
NNNNRSYSNIP
CBL_PTK
0.5958
p.S517T
DO229540
UTCA
ICGC
NNNNRSYSNIP
CBL_PTK
0.5
p.S534A
SIDM02026
Colorectal Carcinoma
GDSC
NNNNRSYSNIP
CBL_PTK
0.7588
p.P537S
SIDM00700
Non-Small Cell Lung Carcinoma
GDSC
NNNNRSYSNIP
CBL_PTK
0.6752
p.P537S
ACH-001363
Lung Cancer
CCLE
NNNNRSYSNIP
CBL_PTK
0.6752
p.P537S
NCI-H2135
lung
COSMIC
NNNNRSYSNIP
CBL_PTK
0.6752
p.Y533D
SIDM00568
Gastric Carcinoma
GDSC
NNNNRSYSNIP
CBL_PTK
0.7325
p.Y533D
OCUM-1
stomach
COSMIC
NNNNRSYSNIP
CBL_PTK
0.7325
p.R541W
SNU-175
large_intestine
COSMIC
NNNNRSYSNIP
CBL_PTK
0.2222
p.L539P
NB13
autonomic_ganglia
COSMIC
NNNNRSYSNIP
CBL_PTK
0.2778
p.S531L
NCI-H1944
lung
COSMIC
NNNNRSYSNIP
CBL_PTK
0.7667
p.L539R
HCC2998
large_intestine
COSMIC
NNNNRSYSNIP
CBL_PTK
0.2778
p.S517F
MKN7
stomach
COSMIC
NNNNRSYSNIP
CBL_PTK
0.5
Drug responses associated with NCOA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NNNNRSYSNIP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15788
Nuclear receptor coactivator 1
CBL_PTK
527:537
NNNNRSYSNIP
CBL
0.916
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