DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
NNSGQYSRYP
Uniprot ID:
Q9P2D1
Source protein:
Chromodomain-helicase-DNA-binding protein 7
Source gene:
CHD7
Class:
CBL_PTK
Location:
305:314
E3 ligase:
CBL
DEGRON score:
0.7339
ASA_SCORE:
88.14
COIL:
0.9144
CONS_SCORE:
0.3175
DSS_SCORE:
0.5436
HELIX:
0.0412
FCONS_SCORE:
1.0437
RIG_SCORE:
0.6922
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N324S
TCGA-19-5956
GBM
TCGA
NNSGQYSRYP
CBL_PTK
0.0556
p.N324S
DO13863
GBM
ICGC
NNSGQYSRYP
CBL_PTK
0.0556
p.R312Q
TCGA-86-8279
LUAD
TCGA
NNSGQYSRYP
CBL_PTK
0.6218
p.R312Q
TCGA-AP-A056
UCEC
TCGA
NNSGQYSRYP
CBL_PTK
0.6218
p.R312Q
DO24140
LUAD
ICGC
NNSGQYSRYP
CBL_PTK
0.6218
p.R312Q
DO43971
UCEC
ICGC
NNSGQYSRYP
CBL_PTK
0.6218
p.S311F
TCGA-AR-A24Q
BRCA
TCGA
NNSGQYSRYP
CBL_PTK
0.7982
p.S311F
DO3524
BRCA
ICGC
NNSGQYSRYP
CBL_PTK
0.7982
p.N317K
TCGA-C4-A0EZ
BLCA
TCGA
NNSGQYSRYP
CBL_PTK
0.25
p.N317K
DO476
BLCA
ICGC
NNSGQYSRYP
CBL_PTK
0.25
p.P314A
TCGA-FD-A43P
BLCA
TCGA
NNSGQYSRYP
CBL_PTK
0.7503
p.P314A
DO44049
BLCA
ICGC
NNSGQYSRYP
CBL_PTK
0.7503
p.Q320E
TCGA-FD-A43P
BLCA
TCGA
NNSGQYSRYP
CBL_PTK
0.1667
p.Q320E
TCGA-R6-A6Y0
ESCA
TCGA
NNSGQYSRYP
CBL_PTK
0.1667
p.Q320E
DO44049
BLCA
ICGC
NNSGQYSRYP
CBL_PTK
0.1667
p.S316I
DO50921
LICA
ICGC
NNSGQYSRYP
CBL_PTK
0.2778
p.I304V
SIDM00845
Burkitt's Lymphoma
GDSC
NNSGQYSRYP
CBL_PTK
0.3056
p.I304V
SIDM00946
T-Lymphoblastic Leukemia
GDSC
NNSGQYSRYP
CBL_PTK
0.3056
p.I304V
SIDM01519
Head and Neck Carcinoma
GDSC
NNSGQYSRYP
CBL_PTK
0.3056
p.I304V
ACH-000786
Lymphoma
CCLE
NNSGQYSRYP
CBL_PTK
0.3056
p.I304V
ACH-000992
Head and Neck Cancer
CCLE
NNSGQYSRYP
CBL_PTK
0.3056
p.I304V
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
NNSGQYSRYP
CBL_PTK
0.3056
p.N319K
SIDM01611
Endometrial Carcinoma
GDSC
NNSGQYSRYP
CBL_PTK
0.1944
p.N319K
ACH-000996
Endometrial/Uterine Cancer
CCLE
NNSGQYSRYP
CBL_PTK
0.1944
Drug responses associated with CHD7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NNSGQYSRYP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P2D1
Chromodomain-helicase-DNA-binding protein 7
CBL_PTK
305:314
NNSGQYSRYP
CBL
0.7339
More...